Genomics and conservation: Guidance from training to analyses and applications
Environmental change is intensifying the biodiversity crisis and threatening species across
the tree of life. Conservation genomics can help inform conservation actions and slow …
the tree of life. Conservation genomics can help inform conservation actions and slow …
Hypothalamic tanycytes as mediators of maternally programmed seasonal plasticity
VJ Melum, CS de Miera, FAF Markussen… - Current Biology, 2024 - cell.com
In mammals, maternal photoperiodic programming (MPP) provides a means whereby
juvenile development can be matched to forthcoming seasonal environmental conditions. 1 …
juvenile development can be matched to forthcoming seasonal environmental conditions. 1 …
An overlooked phenomenon: complex interactions of potential error sources on the quality of bacterial de novo genome assemblies
Background Parameters adversely affecting the contiguity and accuracy of the assemblies
from Illumina next-generation sequencing (NGS) are well described. However, past studies …
from Illumina next-generation sequencing (NGS) are well described. However, past studies …
Plasmid-mediated acquisition and chromosomal integration of blaCTX-M-14 in a subclade of Escherichia coli ST131-H30 clade C1
K Komori, K Aoki, S Harada, Y Ishii… - Antimicrobial Agents …, 2024 - journals.asm.org
Escherichia coli ST131 is a multidrug-resistant lineage associated with the global spread of
extended-spectrum β-lactamase-producing organisms. Particularly, ST131 clade C1 is the …
extended-spectrum β-lactamase-producing organisms. Particularly, ST131 clade C1 is the …
A Haplotype-resolved, Chromosome-scale Genome for Malus domestica Borkh. 'WA 38'
Genome sequencing for agriculturally important Rosaceous crops has made rapid progress
both in completeness and annotation quality. Whole genome sequence and annotation …
both in completeness and annotation quality. Whole genome sequence and annotation …
Lessons from assembling UCEs: A comparison of common methods and the case of Clavinomia (Halictidae)
S Bossert, A Pauly, BN Danforth… - Molecular Ecology …, 2024 - Wiley Online Library
Sequence data assembly is a foundational step in high‐throughput sequencing, with untold
consequences for downstream analyses. Despite this, few studies have interrogated the …
consequences for downstream analyses. Despite this, few studies have interrogated the …
Whole-Genome Sequencing Analyses Reveal the Evolution Mechanisms of Typical Biological Features of Decapterus maruadsi
WJ Deng, QQ Li, HN Shuai, RX Wu, SF Niu, QH Wang… - Animals, 2024 - mdpi.com
Simple Summary In this study, a high-quality chromosomal-level genome of male
Decapterus maruadsi was assembled based on Illumina, PacBio, and Hi-C technology …
Decapterus maruadsi was assembled based on Illumina, PacBio, and Hi-C technology …
Microbiome of seventh-century old Parsurameswara stone monument of India and role of desiccation-tolerant cyanobacterium Lyngbya corticicola on its …
N Parvin, S Mandal, J Rath - Biofouling, 2024 - Taylor & Francis
The Parsurameswara stone monument, built in the seventh century, is one of the oldest
stone monuments in Odisha, India. Metagenomic analysis of the biological crust samples …
stone monuments in Odisha, India. Metagenomic analysis of the biological crust samples …
Whole-Genome Sequencing Analyses Reveal the Whip-like Tail Formation, Innate Immune Evolution, and DNA Repair Mechanisms of Eupleurogrammus muticus
FY Han, RX Wu, BB Miao, SF Niu, QH Wang, ZB Liang - Animals, 2024 - mdpi.com
Simple Summary We constructed a high-quality genome assembly of Eupleurogrammus
muticus at the chromosomal level using PacBio SMRT, Illumina Nova-Seq, and Hi-C …
muticus at the chromosomal level using PacBio SMRT, Illumina Nova-Seq, and Hi-C …
Applying nanopore sequencing technology in Paracoccidioides sp.: a high-quality DNA isolation method for next-generation genomic studies
MN Lorenzini Campos, AF Amadio… - Microbial …, 2024 - microbiologyresearch.org
Paracoccidioidomycosis is a severe systemic endemic mycosis caused by Paracoccidioides
spp. which mainly affects individuals in Latin America. Progress in Paracoccidioides …
spp. which mainly affects individuals in Latin America. Progress in Paracoccidioides …