Non-coding RNAs and their integrated networks

P Zhang, W Wu, Q Chen, M Chen - Journal of integrative …, 2019 - degruyter.com
Eukaryotic genomes are pervasively transcribed. Besides protein-coding RNAs, there are
different types of non-coding RNAs that modulate complex molecular and cellular …

Proteoglycan chemical diversity drives multifunctional cell regulation and therapeutics

NK Karamanos, Z Piperigkou, AD Theocharis… - Chemical …, 2018 - ACS Publications
The extracellular matrix (ECM) constitutes a highly dynamic three-dimensional structural
network comprised of macromolecules, such as proteoglycans/glycosaminoglycans …

A ceRNA hypothesis: the Rosetta Stone of a hidden RNA language?

L Salmena, L Poliseno, Y Tay, L Kats, PP Pandolfi - cell, 2011 - cell.com
Here, we present a unifying hypothesis about how messenger RNAs, transcribed
pseudogenes, and long noncoding RNAs" talk" to each other using microRNA response …

ceRNA cross-talk in cancer: when ce-bling rivalries go awry

FA Karreth, PP Pandolfi - Cancer discovery, 2013 - AACR
The cancer transcriptome is characterized by aberrant expression of both protein-coding
and noncoding transcripts. Similar to mRNAs, a significant portion of the noncoding …

A coding-independent function of gene and pseudogene mRNAs regulates tumour biology

L Poliseno, L Salmena, J Zhang, B Carver… - Nature, 2010 - nature.com
The canonical role of messenger RNA (mRNA) is to deliver protein-coding information to
sites of protein synthesis. However, given that microRNAs bind to RNAs, we hypothesized …

The multilayered complexity of ceRNA crosstalk and competition

Y Tay, J Rinn, PP Pandolfi - Nature, 2014 - nature.com
Recent reports have described an intricate interplay among diverse RNA species, including
protein-coding messenger RNAs and non-coding RNAs such as long non-coding RNAs …

[HTML][HTML] Coding-independent regulation of the tumor suppressor PTEN by competing endogenous mRNAs

Y Tay, L Kats, L Salmena, D Weiss, SM Tan, U Ala… - Cell, 2011 - cell.com
Here, we demonstrate that protein-coding RNA transcripts can crosstalk by competing for
common microRNAs, with microRNA response elements as the foundation of this …

Foxo3 activity promoted by non-coding effects of circular RNA and Foxo3 pseudogene in the inhibition of tumor growth and angiogenesis

W Yang, WW Du, X Li, AJ Yee, BB Yang - Oncogene, 2016 - nature.com
It has recently been shown that the upregulation of a pseudogene specific to a protein-
coding gene could function as a sponge to bind multiple potential targeting microRNAs …

Tumor suppressor miR-34a targets PD-L1 and functions as a potential immunotherapeutic target in acute myeloid leukemia

XI Wang, J Li, KE Dong, F Lin, M Long, Y Ouyang… - Cellular signalling, 2015 - Elsevier
Abstract miRNA (miR) 34a has been shown to modulate critical gene transcripts involved in
tumorigenesis, but its role in tumor-mediated immunosuppression is largely unknown. PD …

Exosomes secreted by human cells transport largely mRNA fragments that are enriched in the 3′-untranslated regions

AO Batagov, IV Kurochkin - Biology direct, 2013 - Springer
Small secreted membrane vesicles called exosomes have recently attracted a great interest
after the discovery that they transfer mRNA that can be translated into protein in recipient …