Advancing personalized medicine through the application of whole exome sequencing and big data analytics

P Suwinski, CK Ong, MHT Ling, YM Poh… - Frontiers in …, 2019 - frontiersin.org
There is a growing attention toward personalized medicine. This is led by a fundamental
shift from the 'one size fits all'paradigm for treatment of patients with conditions or …

RNA sequencing of the tumor microenvironment in precision cancer immunotherapy

D Lau, AM Bobe, AA Khan - Trends in cancer, 2019 - cell.com
RNA sequencing (RNA-seq) provides an efficient high-throughput technique to robustly
characterize the tumor immune microenvironment (TME). The increasing use of RNA-seq in …

Marine biofilms on different fouling control coating types reveal differences in microbial community composition and abundance

M Papadatou, SC Robson, S Dobretsov… - …, 2021 - Wiley Online Library
Marine biofouling imposes serious environmental and economic impacts on marine
applications, especially in the shipping industry. To combat biofouling, protective coatings …

A Practical Approach to Genome Assembly and Annotation of Basidiomycota Using the Example of Armillaria

DL Narh Mensah, BD Wingfield, MPA Coetzee - BioTechniques, 2023 - Taylor & Francis
Technological advancements in genome sequencing, assembly and annotation platforms
and algorithms that resulted in several genomic studies have created an opportunity to …

[HTML][HTML] Investigating geological records of tsunamis in Western Thailand with environmental DNA

W Yap, AD Switzer, C Gouramanis, BP Horton… - Marine Geology, 2023 - Elsevier
The identification of tsunami deposits in the geological record remains a challenge because
the proxies availabilities are subject to the environment. The proxies may degrade over time …

EnsembleSplice: ensemble deep learning model for splice site prediction

V Akpokiro, T Martin, O Oluwadare - BMC bioinformatics, 2022 - Springer
Background Identifying splice site regions is an important step in the genomic DNA
sequencing pipelines of biomedical and pharmaceutical research. Within this research …

Powdery Mildew of Bigleaf Hydrangea: Biology, Control, and Breeding Strategies for Resistance

C Jennings, F Baysal-Gurel, LW Alexander - Horticulturae, 2024 - mdpi.com
Hydrangea macrophylla, commonly known as bigleaf, garden, French, or florist hydrangea,
is the most economically important member of the Hydrangea genus, with a breeding history …

Metagenomics approaches for studying the human microbiome

B Moges, DY Mengistu - All Life, 2024 - Taylor & Francis
The human body harbors an extremely complex and dynamic microbial community (10-100
trillion) of bacteria, archaea, viruses, and eukaryotes. The human microbiota plays a crucial …

[PDF][PDF] EnsembleSplice: Ensemble Deep Learning for Splice Site Prediction

T Martin, O Oluwadare - Deep Learning, 2021 - faculty.uccs.edu
Identifying splice site (SS) regions is an important step in genomic DNA sequencing
pipelines for biomedical and pharmaceutical research. Within this research purview, efficient …

Analytical Pipelines for the GBS Analysis

V Rachappanavar, A Padiyal… - … by Sequencing for …, 2022 - Wiley Online Library
Technological advances in sequencing led to the development of next‐generation
sequencing (NGS) platforms. Over the period different sequencing platforms are developed …