Critical assessment of methods of protein structure prediction (CASP)—Round XIII
CASP (critical assessment of structure prediction) assesses the state of the art in modeling
protein structure from amino acid sequence. The most recent experiment (CASP13 held in …
protein structure from amino acid sequence. The most recent experiment (CASP13 held in …
A decade of CASP: progress, bottlenecks and prognosis in protein structure prediction
J Moult - Current opinion in structural biology, 2005 - Elsevier
For the past ten years, CASP (Critical Assessment of Structure Prediction) has monitored the
state of the art in modeling protein structure from sequence. During this period, there has …
state of the art in modeling protein structure from sequence. During this period, there has …
Learning from protein structure with geometric vector perceptrons
Learning on 3D structures of large biomolecules is emerging as a distinct area in machine
learning, but there has yet to emerge a unifying network architecture that simultaneously …
learning, but there has yet to emerge a unifying network architecture that simultaneously …
Critical assessment of methods of protein structure prediction (CASP)—Round XIV
Critical assessment of structure prediction (CASP) is a community experiment to advance
methods of computing three‐dimensional protein structure from amino acid sequence. Core …
methods of computing three‐dimensional protein structure from amino acid sequence. Core …
lDDT: a local superposition-free score for comparing protein structures and models using distance difference tests
Motivation: The assessment of protein structure prediction techniques requires objective
criteria to measure the similarity between a computational model and the experimentally …
criteria to measure the similarity between a computational model and the experimentally …
Methods of protein structure comparison
I Kufareva, R Abagyan - Homology modeling: Methods and protocols, 2012 - Springer
Despite its apparent simplicity, the problem of quantifying the differences between two
structures of the same protein or complex is nontrivial and continues evolving. In this …
structures of the same protein or complex is nontrivial and continues evolving. In this …
LGA: a method for finding 3D similarities in protein structures
A Zemla - Nucleic acids research, 2003 - academic.oup.com
We present the LGA (Local-Global Alignment) method, designed to facilitate the comparison
of protein structures or fragments of protein structures in sequence dependent and …
of protein structures or fragments of protein structures in sequence dependent and …
[图书][B] Introduction to proteins: structure, function, and motion
Introduction to Proteins provides a comprehensive and state-of-the-art introduction to the
structure, function, and motion of proteins for students, faculty, and researchers at all levels …
structure, function, and motion of proteins for students, faculty, and researchers at all levels …
[HTML][HTML] Homology modeling a fast tool for drug discovery: current perspectives
VK Vyas, RD Ukawala, M Ghate… - Indian journal of …, 2012 - ncbi.nlm.nih.gov
Major goal of structural biology involve formation of protein-ligand complexes; in which the
protein molecules act energetically in the course of binding. Therefore, perceptive of protein …
protein molecules act energetically in the course of binding. Therefore, perceptive of protein …
Critical assessment of methods of protein structure prediction: Progress and new directions in round XI
Modeling of protein structure from amino acid sequence now plays a major role in structural
biology. Here we report new developments and progress from the CASP11 community …
biology. Here we report new developments and progress from the CASP11 community …