Standards for distribution models in biodiversity assessments

MB Araújo, RP Anderson, A Márcia Barbosa… - Science …, 2019 - science.org
Demand for models in biodiversity assessments is rising, but which models are adequate for
the task? We propose a set of best-practice standards and detailed guidelines enabling …

A review of evidence about use and performance of species distribution modelling ensembles like BIOMOD

T Hao, J Elith, G Guillera‐Arroita… - Diversity and …, 2019 - Wiley Online Library
Aim The idea of combining predictions from different models into an ensemble has gained
considerable popularity in species distribution modelling, partly due to free and …

SDMtoolbox 2.0: the next generation Python-based GIS toolkit for landscape genetic, biogeographic and species distribution model analyses

JL Brown, JR Bennett, CM French - PeerJ, 2017 - peerj.com
SDMtoolbox 2.0 is a software package for spatial studies of ecology, evolution, and genetics.
The release of SDMtoolbox 2.0 allows researchers to use the most current ArcGIS software …

Evaluating collinearity effects on species distribution models: An approach based on virtual species simulation

P De Marco, CC Nóbrega - PloS one, 2018 - journals.plos.org
The increasing use of species distribution modeling (SDM) has raised new concerns
regarding the inaccuracies, misunderstanding, and misuses of this important tool. One of …

spThin: an R package for spatial thinning of species occurrence records for use in ecological niche models

ME Aiello‐Lammens, RA Boria, A Radosavljevic… - …, 2015 - Wiley Online Library
Spatial thinning of species occurrence records can help address problems associated with
spatial sampling biases. Ideally, thinning removes the fewest records necessary to …

ENMeval: An R package for conducting spatially independent evaluations and estimating optimal model complexity for Maxent ecological niche models

R Muscarella, PJ Galante… - Methods in ecology …, 2014 - Wiley Online Library
Recent studies have demonstrated a need for increased rigour in building and evaluating
ecological niche models (ENM s) based on presence‐only occurrence data. Two major …

Making better Maxent models of species distributions: complexity, overfitting and evaluation

A Radosavljevic, RP Anderson - Journal of biogeography, 2014 - Wiley Online Library
Aim Models of species niches and distributions have become invaluable to biogeographers
over the past decade, yet several outstanding methodological issues remain. Here we …

A practical guide to MaxEnt for modeling species' distributions: what it does, and why inputs and settings matter

C Merow, MJ Smith, JA Silander Jr - Ecography, 2013 - Wiley Online Library
The MaxEnt software package is one of the most popular tools for species distribution and
environmental niche modeling, with over 1000 published applications since 2006. Its …

ENVIREM: an expanded set of bioclimatic and topographic variables increases flexibility and improves performance of ecological niche modeling

PO Title, JB Bemmels - Ecography, 2018 - Wiley Online Library
Species distribution modeling is a valuable tool with many applications across ecology and
evolutionary biology. The selection of biologically meaningful environmental variables that …

Spatial filtering to reduce sampling bias can improve the performance of ecological niche models

RA Boria, LE Olson, SM Goodman, RP Anderson - Ecological modelling, 2014 - Elsevier
This study employs spatial filtering of occurrence data with the aim of reducing overfitting to
sampling bias in ecological niche models (ENMs). Sampling bias in geographic space leads …