Rice functional genomics: decades' efforts and roads ahead

R Chen, Y Deng, Y Ding, J Guo, J Qiu, B Wang… - Science China Life …, 2022 - Springer
Rice (Oryza sativa L.) is one of the most important crops in the world. Since the completion of
rice reference genome sequences, tremendous progress has been achieved in …

[HTML][HTML] Molecular bases of rice grain size and quality for optimized productivity

D Ren, C Ding, Q Qian - Science Bulletin, 2023 - Elsevier
The accomplishment of further optimization of crop productivity in grain yield and quality is a
great challenge. Grain size is one of the crucial determinants of rice yield and quality; all of …

A graph-based genome and pan-genome variation of the model plant Setaria

Q He, S Tang, H Zhi, J Chen, J Zhang, H Liang… - Nature …, 2023 - nature.com
Setaria italica (foxtail millet), a founder crop of East Asian agriculture, is a model plant for C4
photosynthesis and developing approaches to adaptive breeding across multiple climates …

[HTML][HTML] A route to de novo domestication of wild allotetraploid rice

H Yu, T Lin, X Meng, H Du, J Zhang, G Liu, M Chen… - Cell, 2021 - cell.com
Cultivated rice varieties are all diploid, and polyploidization of rice has long been desired
because of its advantages in genome buffering, vigorousness, and environmental …

An efficient CRISPR–Cas12a promoter editing system for crop improvement

J Zhou, G Liu, Y Zhao, R Zhang, X Tang, L Li, X Jia… - Nature Plants, 2023 - nature.com
Promoter editing represents an innovative approach to introduce quantitative trait variation
(QTV) in crops. However, an efficient promoter editing system for QTV needs to be …

Structure and function of rice hybrid genomes reveal genetic basis and optimal performance of heterosis

Z Gu, J Gong, Z Zhu, Z Li, Q Feng, C Wang, Y Zhao… - Nature Genetics, 2023 - nature.com
Exploitation of crop heterosis is crucial for increasing global agriculture production.
However, the quantitative genomic analysis of heterosis was lacking, and there is currently …

Genome-wide association studies dissect the genetic networks underlying agronomical traits in soybean

C Fang, Y Ma, S Wu, Z Liu, Z Wang, R Yang, G Hu… - Genome biology, 2017 - Springer
Abstract Background Soybean (Glycine max [L.] Merr.) is one of the most important oil and
protein crops. Ever-increasing soybean consumption necessitates the improvement of …

Rational design of high-yield and superior-quality rice

D Zeng, Z Tian, Y Rao, G Dong, Y Yang, L Huang… - Nature plants, 2017 - nature.com
Rice (Oryza sativa L.) is a staple food for more than half of the world's population. To meet
the ever-increasing demand for food, because of population growth and improved living …

A rare allele of GS2 enhances grain size and grain yield in rice

J Hu, Y Wang, Y Fang, L Zeng, J Xu, H Yu, Z Shi, J Pan… - Molecular plant, 2015 - cell.com
Grain size determines grain weight and affects grain quality. Several major quantitative trait
loci (QTLs) regulating grain size have been cloned; however, our understanding of the …

The OsSPL16-GW7 regulatory module determines grain shape and simultaneously improves rice yield and grain quality

S Wang, S Li, Q Liu, K Wu, J Zhang, S Wang, Y Wang… - Nature …, 2015 - nature.com
The deployment of heterosis in the form of hybrid rice varieties has boosted grain yield, but
grain quality improvement still remains a challenge. Here we show that a quantitative trait …