Directed evolution: methodologies and applications
Directed evolution aims to expedite the natural evolution process of biological molecules
and systems in a test tube through iterative rounds of gene diversifications and library …
and systems in a test tube through iterative rounds of gene diversifications and library …
In vivo hypermutation and continuous evolution
Directed evolution has revolutionized biomolecular engineering by applying cycles of
mutation, amplification and selection to genes of interest (GOIs). However, classical directed …
mutation, amplification and selection to genes of interest (GOIs). However, classical directed …
Engineered bacterial orthogonal DNA replication system for continuous evolution
R Tian, R Zhao, H Guo, K Yan, C Wang, C Lu… - Nature Chemical …, 2023 - nature.com
Continuous evolution can generate biomolecules for synthetic biology and enable
evolutionary investigation. The orthogonal DNA replication system (OrthoRep) in yeast can …
evolutionary investigation. The orthogonal DNA replication system (OrthoRep) in yeast can …
Recent advances in metabolic engineering of Saccharomyces cerevisiae: new tools and their applications
Metabolic engineering aims to develop efficient cell factories by rewiring cellular
metabolism. As one of the most commonly used cell factories, Saccharomyces cerevisiae …
metabolism. As one of the most commonly used cell factories, Saccharomyces cerevisiae …
Systems metabolic engineering strategies: integrating systems and synthetic biology with metabolic engineering
Metabolic engineering allows development of microbial strains efficiently producing
chemicals and materials, but it requires much time, effort, and cost to make the strains …
chemicals and materials, but it requires much time, effort, and cost to make the strains …
Scalable, continuous evolution of genes at mutation rates above genomic error thresholds
A Ravikumar, GA Arzumanyan, MKA Obadi… - Cell, 2018 - cell.com
Directed evolution is a powerful approach for engineering biomolecules and understanding
adaptation. However, experimental strategies for directed evolution are notoriously labor …
adaptation. However, experimental strategies for directed evolution are notoriously labor …
Precise, automated control of conditions for high-throughput growth of yeast and bacteria with eVOLVER
BG Wong, CP Mancuso, S Kiriakov, CJ Bashor… - Nature …, 2018 - nature.com
Precise control over microbial cell growth conditions could enable detection of minute
phenotypic changes, which would improve our understanding of how genotypes are shaped …
phenotypic changes, which would improve our understanding of how genotypes are shaped …
Systematic molecular evolution enables robust biomolecule discovery
EA DeBenedictis, EJ Chory, DW Gretton, B Wang… - Nature …, 2022 - nature.com
Evolution occurs when selective pressures from the environment shape inherited variation
over time. Within the laboratory, evolution is commonly used to engineer proteins and RNA …
over time. Within the laboratory, evolution is commonly used to engineer proteins and RNA …
Saccharomyces cerevisiae strains for second-generation ethanol production: from academic exploration to industrial implementation
MLA Jansen, JM Bracher, I Papapetridis… - FEMS yeast …, 2017 - academic.oup.com
The recent start-up of several full-scale 'second generation'ethanol plants marks a major
milestone in the development of Saccharomyces cerevisiae strains for fermentation of …
milestone in the development of Saccharomyces cerevisiae strains for fermentation of …
A Processive Protein Chimera Introduces Mutations across Defined DNA Regions In Vivo
CL Moore, LJ Papa III… - Journal of the American …, 2018 - ACS Publications
Laboratory time scale evolution in vivo relies on the generation of large, mutationally diverse
gene libraries to rapidly explore biomolecule sequence landscapes. Traditional global …
gene libraries to rapidly explore biomolecule sequence landscapes. Traditional global …