RNA polymerase II speed: a key player in controlling and adapting transcriptome composition

L Muniz, E Nicolas, D Trouche - The EMBO journal, 2021 - embopress.org
Abstract RNA polymerase II (RNA Pol II) speed or elongation rate, ie, the number of
nucleotides synthesized per unit of time, is a major determinant of transcriptome …

[HTML][HTML] Anything but ordinary–emerging splicing mechanisms in eukaryotic gene regulation

NH Gehring, JY Roignant - Trends in Genetics, 2021 - cell.com
Splicing of precursor mRNAs (pre-mRNA) is an important step during eukaryotic gene
expression. The identification of the actual splice sites and the proper removal of introns are …

[HTML][HTML] Ageing-associated changes in transcriptional elongation influence longevity

C Debès, A Papadakis, S Grönke, Ö Karalay, LS Tain… - Nature, 2023 - nature.com
Physiological homeostasis becomes compromised during ageing, as a result of impairment
of cellular processes, including transcription and RNA splicing,,–. However, the molecular …

[PDF][PDF] Co-transcriptional splicing regulates 3′ end cleavage during mammalian erythropoiesis

KA Reimer, CA Mimoso, K Adelman, KM Neugebauer - Molecular cell, 2021 - cell.com
Pre-mRNA processing steps are tightly coordinated with transcription in many organisms. To
determine how co-transcriptional splicing is integrated with transcription elongation and 3 …

[PDF][PDF] Alternative RNA structures formed during transcription depend on elongation rate and modify RNA processing

T Saldi, K Riemondy, B Erickson, DL Bentley - Molecular cell, 2021 - cell.com
Most RNA processing occurs co-transcriptionally. We interrogated nascent pol II transcripts
by chemical and enzymatic probing and determined how the" nascent RNA structureome" …

Pre-mRNA splicing and its cotranscriptional connections

H Shenasa, DL Bentley - Trends in Genetics, 2023 - cell.com
Transcription of eukaryotic genes by RNA polymerase II (Pol II) yields RNA precursors
containing introns that must be spliced out and the flanking exons ligated together. Splicing …

Early rRNA processing is a stress-dependent regulatory event whose inhibition maintains nucleolar integrity

W Szaflarski, M Leśniczak-Staszak… - Nucleic acids …, 2022 - academic.oup.com
The production of ribosomes is an energy-intensive process owing to the intricacy of these
massive macromolecular machines. Each human ribosome contains 80 ribosomal proteins …

RNA helicase-dependent gene looping impacts messenger RNA processing

S Terrone, J Valat, N Fontrodona, G Giraud… - Nucleic Acids …, 2022 - academic.oup.com
Abstract DDX5 and DDX17 are DEAD-box RNA helicase paralogs which regulate several
aspects of gene expression, especially transcription and splicing, through incompletely …

Transcription and splicing: A two‐way street

M Tellier, I Maudlin, S Murphy - Wiley Interdisciplinary Reviews …, 2020 - Wiley Online Library
RNA synthesis by RNA polymerase II and RNA processing are closely coupled during the
transcription cycle of protein‐coding genes. This coupling affords opportunities for quality …

LncRNA FLAIL affects alternative splicing and represses flowering in Arabidopsis

Y Jin, M Ivanov, AN Dittrich, ADL Nelson… - The EMBO …, 2023 - embopress.org
How the noncoding genome affects cellular functions is a key biological question. A
particular challenge is to distinguish the effects of noncoding DNA elements from long …