[HTML][HTML] Small RNAs, large networks: posttranscriptional regulons in gram-negative bacteria

K Papenfort, S Melamed - Annual review of microbiology, 2023 - annualreviews.org
Small regulatory RNA (sRNAs) are key mediators of posttranscriptional gene control in
bacteria. Assisted by RNA-binding proteins, a single sRNA often modulates the expression …

Small RNAs in bacteria and archaea: who they are, what they do, and how they do it

EGH Wagner, P Romby - Advances in genetics, 2015 - Elsevier
Small RNAs are ubiquitously present regulators in all kingdoms of life. Most bacterial and
archaeal small RNAs (sRNAs) act by antisense mechanisms on multiple target mRNAs …

Cold shock response in bacteria

Y Zhang, CA Gross - Annual Review of Genetics, 2021 - annualreviews.org
Bacteria often encounter temperature fluctuations in their natural habitats and must adapt to
survive. The molecular response of bacteria to sudden temperature upshift or downshift is …

Envelope stress responses: balancing damage repair and toxicity

AM Mitchell, TJ Silhavy - Nature Reviews Microbiology, 2019 - nature.com
The Gram-negative envelope is a complex structure that consists of the inner membrane, the
periplasm, peptidoglycan and the outer membrane, and protects the bacterial cell from the …

[HTML][HTML] Trouble is coming: Signaling pathways that regulate general stress responses in bacteria

S Gottesman - Journal of Biological Chemistry, 2019 - ASBMB
Bacteria can rapidly and reversibly respond to changing environments via complex
transcriptional and post-transcriptional regulatory mechanisms. Many of these adaptations …

[HTML][HTML] An infection-relevant transcriptomic compendium for Salmonella enterica Serovar Typhimurium

C Kröger, A Colgan, S Srikumar, K Händler… - Cell host & …, 2013 - cell.com
Bacterial transcriptional networks consist of hundreds of transcription factors and thousands
of promoters. However, the true complexity of transcription in a bacterial pathogen and the …

[HTML][HTML] In vivo cleavage map illuminates the central role of RNase E in coding and non-coding RNA pathways

Y Chao, L Li, D Girodat, KU Förstner, N Said… - Molecular cell, 2017 - cell.com
Understanding RNA processing and turnover requires knowledge of cleavages by major
endoribonucleases within a living cell. We have employed TIER-seq (transiently inactivating …

Bacterial small RNA regulators: versatile roles and rapidly evolving variations

S Gottesman, G Storz - Cold Spring Harbor perspectives …, 2011 - cshperspectives.cshlp.org
Small RNA regulators (sRNAs) have been identified in a wide range of bacteria and found to
play critical regulatory roles in many processes. The major families of sRNAs include true …

The RpoS-Mediated General Stress Response in Escherichia coli

A Battesti, N Majdalani… - Annual review of …, 2011 - annualreviews.org
Under conditions of nutrient deprivation or stress, or as cells enter stationary phase,
Escherichia coli and related bacteria increase the accumulation of RpoS, a specialized …

Stationary phase in gram-negative bacteria

JM Navarro Llorens, A Tormo… - FEMS microbiology …, 2010 - academic.oup.com
Conditions that sustain constant bacterial growth are seldom found in nature. Oligotrophic
environments and competition among microorganisms force bacteria to be able to adapt …