Regulation, functions and transmission of bivalent chromatin during mammalian development

TA Macrae, J Fothergill-Robinson… - … reviews Molecular cell …, 2023 - nature.com
Cells differentiate and progress through development guided by a dynamic chromatin
landscape that mediates gene expression programmes. During development, mammalian …

Born to run: control of transcription elongation by RNA polymerase II

FX Chen, ER Smith, A Shilatifard - Nature reviews Molecular cell …, 2018 - nature.com
The dynamic regulation of transcription elongation by RNA polymerase II (Pol II) is an
integral part of the implementation of gene expression programmes during development. In …

Epigenome in early mammalian development: inheritance, reprogramming and establishment

Q Xu, W Xie - Trends in cell biology, 2018 - cell.com
Drastic epigenetic reprogramming takes place during preimplantation development, leading
to the conversion of terminally differentiated gametes to a totipotent embryo. Deficiencies in …

Long noncoding RNA MANTIS facilitates endothelial angiogenic function

MS Leisegang, C Fork, I Josipovic, FM Richter… - Circulation, 2017 - Am Heart Assoc
Background: The angiogenic function of endothelial cells is regulated by numerous
mechanisms, but the impact of long noncoding RNAs (lncRNAs) has hardly been studied …

[HTML][HTML] Understanding the interplay between CpG island-associated gene promoters and H3K4 methylation

AL Hughes, JR Kelley, RJ Klose - Biochimica et Biophysica Acta (BBA) …, 2020 - Elsevier
The precise regulation of gene transcription is required to establish and maintain cell type-
specific gene expression programs during multicellular development. In addition to …

[HTML][HTML] Integrative pan cancer analysis reveals epigenomic variation in cancer type and cell specific chromatin domains

LK Gopi, BL Kidder - Nature communications, 2021 - nature.com
Epigenetic mechanisms contribute to the initiation and development of cancer, and
epigenetic variation promotes dynamic gene expression patterns that facilitate tumor …

Histone demethylases in chromatin biology and beyond

E Dimitrova, AH Turberfield, RJ Klose - EMBO reports, 2015 - embopress.org
Histone methylation plays fundamental roles in regulating chromatin‐based processes. With
the discovery of histone demethylases over a decade ago, it is now clear that histone …

[HTML][HTML] Mesenchymal stem cells under epigenetic control–the role of epigenetic machinery in fate decision and functional properties

A Walewska, A Janucik, M Tynecka, M Moniuszko… - Cell Death & …, 2023 - nature.com
Mesenchymal stem cells (mesenchymal stromal cells, MSC) are multipotent stem cells that
can differentiate into cells of at least three mesodermal lineages, namely adipocytes …

Disrupted intricacy of histone H3K4 methylation in neurodevelopmental disorders

CN Vallianatos, S Iwase - Epigenomics, 2015 - Taylor & Francis
Methylation of histone H3 lysine 4 (H3K4me) is an intricately regulated posttranslational
modification, which is broadly associated with enhancers and promoters of actively …

[HTML][HTML] DNA methylation regulates discrimination of enhancers from promoters through a H3K4me1-H3K4me3 seesaw mechanism

A Sharifi-Zarchi, D Gerovska, K Adachi, M Totonchi… - BMC genomics, 2017 - Springer
Background DNA methylation at promoters is largely correlated with inhibition of gene
expression. However, the role of DNA methylation at enhancers is not fully understood …