The biology of restriction and anti-restriction

MR Tock, DTF Dryden - Current opinion in microbiology, 2005 - Elsevier
The phenomena of prokaryotic restriction and modification, as well as anti-restriction, were
first discovered five decades ago but have yielded only gradually to rigorous analysis. Work …

Type I restriction systems: sophisticated molecular machines (a legacy of Bertani and Weigle)

NE Murray - Microbiology and molecular biology reviews, 2000 - Am Soc Microbiol
Restriction enzymes are well known as reagents widely used by molecular biologists for
genetic manipulation and analysis, but these reagents represent only one class (type II) of a …

Behavior of restriction–modification systems as selfish mobile elements and their impact on genome evolution

I Kobayashi - Nucleic acids research, 2001 - academic.oup.com
Restriction–modification (RM) systems are composed of genes that encode a restriction
enzyme and a modification methylase. RM systems sometimes behave as discrete units of …

Phage T7 DNA mimic protein Ocr is a potent inhibitor of BREX defence

A Isaev, A Drobiazko, N Sierro, J Gordeeva… - Nucleic acids …, 2020 - academic.oup.com
BREX (for BacteRiophage EXclusion) is a superfamily of common bacterial and archaeal
defence systems active against diverse bacteriophages. While the mechanism of BREX …

The phasevarion: phase variation of type III DNA methyltransferases controls coordinated switching in multiple genes

YN Srikhanta, KL Fox, MP Jennings - Nature Reviews Microbiology, 2010 - nature.com
In several host-adapted pathogens, phase variation has been found to occur in genes that
encode methyltransferases associated with type III restriction–modification systems. It was …

Nucleoside triphosphate-dependent restriction enzymes

DTF Dryden, NE Murray, DN Rao - Nucleic acids research, 2001 - academic.oup.com
The known nucleoside triphosphate-dependent restriction enzymes are hetero-oligomeric
proteins that behave as molecular machines in response to their target sequences. They …

Microbial arsenal of antiviral defenses–part I

AB Isaev, OS Musharova, KV Severinov - Biochemistry (Moscow), 2021 - Springer
Bacteriophages or phages are viruses that infect bacterial cells (for the scope of this review
we will also consider viruses that infect Archaea). Constant threat of phage infection is a …

A type III-like restriction endonuclease functions as a major barrier to horizontal gene transfer in clinical Staphylococcus aureus strains

AR Corvaglia, P François… - Proceedings of the …, 2010 - National Acad Sciences
Staphylococcus aureus is an versatile pathogen that can cause life-threatening infections.
Depending on the clinical setting, up to 50% of S. aureus infections are caused by methicillin …

Immigration control of DNA in bacteria: self versus non-self

NE Murray - Microbiology, 2002 - microbiologyresearch.org
Bacteria commonly endow their DNA with an identity mark. When DNA is transferred from
one bacterium to another strain of the same species, DNA that lacks the identification mark …

Shaping the genome–restriction–modification systems as mobile genetic elements

I Kobayashi, A Nobusato… - Current opinion in …, 1999 - Elsevier
A restriction enzyme gene is often linked to a modification methylase gene the role of which
is to protect a recognition site on DNA from breakage by the former. Loss of some restriction …