X-ray-based 3D virtual histology—Adding the next dimension to histological analysis
Histology and immunohistochemistry of thin tissue sections have been the standard
diagnostic procedure in many diseases for decades. This method is highly specific for …
diagnostic procedure in many diseases for decades. This method is highly specific for …
Machine learning analysis of whole mouse brain vasculature
Tissue clearing methods enable the imaging of biological specimens without sectioning.
However, reliable and scalable analysis of large imaging datasets in three dimensions …
However, reliable and scalable analysis of large imaging datasets in three dimensions …
Dense neuronal reconstruction through X-ray holographic nano-tomography
AT Kuan - Biophysical Journal, 2020 - cell.com
1416-Pos Modulation of Human Stem Cell Derived Neuron Activity through Addition of an
External Conductance using Dynamic Clamp Brian K. Panama1, Leigh Korbel1, Brandon …
External Conductance using Dynamic Clamp Brian K. Panama1, Leigh Korbel1, Brandon …
Three-dimensional virtual histology of human cerebellum by X-ray phase-contrast tomography
M Töpperwien, F van der Meer… - Proceedings of the …, 2018 - National Acad Sciences
To quantitatively evaluate brain tissue and its corresponding function, knowledge of the 3D
cellular distribution is essential. The gold standard to obtain this information is histology, a …
cellular distribution is essential. The gold standard to obtain this information is histology, a …
Computational 3D histological phenotyping of whole zebrafish by X-ray histotomography
Organismal phenotypes frequently involve multiple organ systems. Histology is a powerful
way to detect cellular and tissue phenotypes, but is largely descriptive and subjective. To …
way to detect cellular and tissue phenotypes, but is largely descriptive and subjective. To …
[PDF][PDF] Upscaling X-ray nanoimaging to macroscopic specimens
Upscaling X-ray nanoimaging to macroscopic specimens has the potential for providing
insights across multiple length scales, but its feasibility has long been an open question. By …
insights across multiple length scales, but its feasibility has long been an open question. By …
Low-dose x-ray tomography through a deep convolutional neural network
Synchrotron-based X-ray tomography offers the potential for rapid large-scale
reconstructions of the interiors of materials and biological tissue at fine resolution. However …
reconstructions of the interiors of materials and biological tissue at fine resolution. However …
Three-dimensional virtual histology of the human hippocampus based on phase-contrast computed tomography
M Eckermann, B Schmitzer… - Proceedings of the …, 2021 - National Acad Sciences
We have studied the three-dimensional (3D) cytoarchitecture of the human hippocampus in
neuropathologically healthy and Alzheimer's disease (AD) individuals, based on phase …
neuropathologically healthy and Alzheimer's disease (AD) individuals, based on phase …
VascuViz: a multimodality and multiscale imaging and visualization pipeline for vascular systems biology
A Bhargava, B Monteagudo, P Kushwaha… - Nature …, 2022 - nature.com
Despite advances in imaging, image-based vascular systems biology has remained
challenging because blood vessel data are often available only from a single modality or at …
challenging because blood vessel data are often available only from a single modality or at …
[HTML][HTML] Virtual histology of an entire mouse brain from formalin fixation to paraffin embedding. Part 1: Data acquisition, anatomical feature segmentation, tracking …
Background: Micrometer-resolution neuroimaging with gold-standard conventional histology
requires tissue fixation and embedding. The exchange of solvents for the creation of …
requires tissue fixation and embedding. The exchange of solvents for the creation of …