Rice functional genomics: decades' efforts and roads ahead

R Chen, Y Deng, Y Ding, J Guo, J Qiu, B Wang… - Science China Life …, 2022 - Springer
Rice (Oryza sativa L.) is one of the most important crops in the world. Since the completion of
rice reference genome sequences, tremendous progress has been achieved in …

Defended to the nines: 25 years of resistance gene cloning identifies nine mechanisms for R protein function

J Kourelis, RAL Van Der Hoorn - The Plant Cell, 2018 - academic.oup.com
Plants have many, highly variable resistance (R) gene loci, which provide resistance to a
variety of pathogens. The first R gene to be cloned, maize (Zea mays) Hm1, was published …

Disease resistance mechanisms in plants

EJ Andersen, S Ali, E Byamukama, Y Yen, MP Nepal - Genes, 2018 - mdpi.com
Plants have developed a complex defense system against diverse pests and pathogens.
Once pathogens overcome mechanical barriers to infection, plant receptors initiate signaling …

Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza

JC Stein, Y Yu, D Copetti, DJ Zwickl, L Zhang… - Nature …, 2018 - nature.com
The genus Oryza is a model system for the study of molecular evolution over time scales
ranging from a few thousand to 15 million years. Using 13 reference genomes spanning the …

Plant NLR diversity: the known unknowns of pan-NLRomes

AC Barragan, D Weigel - The Plant Cell, 2021 - academic.oup.com
Plants and pathogens constantly adapt to each other. As a consequence, many members of
the plant immune system, and especially the intracellular nucleotide-binding site leucine …

Wheat Pm4 resistance to powdery mildew is controlled by alternative splice variants encoding chimeric proteins

J Sánchez-Martín, V Widrig, G Herren, T Wicker… - Nature Plants, 2021 - nature.com
Crop breeding for resistance to pathogens largely relies on genes encoding receptors that
confer race-specific immunity. Here, we report the identification of the wheat Pm4 race …

CRISPR crops: plant genome editing toward disease resistance

T Langner, S Kamoun, K Belhaj - Annual review of …, 2018 - annualreviews.org
Genome editing by sequence-specific nucleases (SSNs) has revolutionized biology by
enabling targeted modifications of genomes. Although routine plant genome editing …

NLR receptors in plant immunity: making sense of the alphabet soup

MP Contreras, D Lüdke, H Pai, AA Toghani… - EMBO …, 2023 - embopress.org
Plants coordinately use cell‐surface and intracellular immune receptors to perceive
pathogens and mount an immune response. Intracellular events of pathogen recognition are …

Effector-triggered immunity: from pathogen perception to robust defense

H Cui, K Tsuda, JE Parker - Annual review of plant biology, 2015 - annualreviews.org
In plant innate immunity, individual cells have the capacity to sense and respond to
pathogen attack. Intracellular recognition mechanisms have evolved to intercept …

The transcriptional landscape of plant infection by the rice blast fungus Magnaporthe oryzae reveals distinct families of temporally co-regulated and structurally …

X Yan, B Tang, LS Ryder, D MacLean, VM Were… - The Plant …, 2023 - academic.oup.com
The rice blast fungus Magnaporthe oryzae causes a devastating disease that threatens
global rice (Oryza sativa) production. Despite intense study, the biology of plant tissue …