Application of different types of CRISPR/Cas-based systems in bacteria

Z Liu, H Dong, Y Cui, L Cong, D Zhang - Microbial cell factories, 2020 - Springer
As important genome editing tools, CRISPR/Cas systems, especially those based on type II
Cas9 and type V Cas12a, are widely used in genetic and metabolic engineering of bacteria …

Escherichia coli as a host for metabolic engineering

S Pontrelli, TY Chiu, EI Lan, FYH Chen, P Chang… - Metabolic …, 2018 - Elsevier
Over the past century, Escherichia coli has become one of the best studied organisms on
earth. Features such as genetic tractability, favorable growth conditions, well characterized …

Dynamic regulation of metabolic flux in engineered bacteria using a pathway-independent quorum-sensing circuit

A Gupta, IMB Reizman, CR Reisch, KLJ Prather - Nature biotechnology, 2017 - nature.com
Metabolic engineering of microorganisms to produce desirable products on an industrial
scale can result in unbalanced cellular metabolic networks that reduce productivity and …

Genome-wide mapping of mutations at single-nucleotide resolution for protein, metabolic and genome engineering

AD Garst, MC Bassalo, G Pines, SA Lynch… - Nature …, 2017 - nature.com
Improvements in DNA synthesis and sequencing have underpinned comprehensive
assessment of gene function in bacteria and eukaryotes. Genome-wide analyses require …

Genome editing in bacteria: CRISPR-Cas and beyond

RD Arroyo-Olarte, R Bravo Rodriguez, E Morales-Ríos - Microorganisms, 2021 - mdpi.com
Genome editing in bacteria encompasses a wide array of laborious and multi-step methods
such as suicide plasmids. The discovery and applications of clustered regularly interspaced …

CRISPR/Cas9-coupled recombineering for metabolic engineering of Corynebacterium glutamicum

JS Cho, KR Choi, CPS Prabowo, JH Shin, D Yang… - Metabolic …, 2017 - Elsevier
Genome engineering of Corynebacterium glutamicum, an important industrial
microorganism for amino acids production, currently relies on random mutagenesis and …

A modified pCas/pTargetF system for CRISPR-Cas9-assisted genome editing in Escherichia coli

Q Li, B Sun, J Chen, Y Zhang… - Acta Biochimica et …, 2021 - academic.oup.com
The clustered regularly interspaced short palindromic repeats (CRISPR)-associated
nuclease 9 (Cas9)-based genome editing tool pCas/pTargetF system that we established …

Development of a CRISPR-Cas9 tool kit for comprehensive engineering of Bacillus subtilis

AW Westbrook, M Moo-Young… - Applied and …, 2016 - Am Soc Microbiol
The establishment of a clustered regularly interspaced short palindromic repeat (CRISPR)-
Cas9 system for strain construction in Bacillus subtilis is essential for its progression toward …

Pre-termination transcription complex: structure and function

Z Hao, V Epshtein, KH Kim, S Proshkin, V Svetlov… - Molecular cell, 2021 - cell.com
Rho is a general transcription termination factor playing essential roles in RNA polymerase
(RNAP) recycling, gene regulation, and genomic stability in most bacteria. Traditional …

Development of a CRISPR/Cas9 genome editing toolbox for Corynebacterium glutamicum

J Liu, Y Wang, Y Lu, P Zheng, J Sun, Y Ma - Microbial cell factories, 2017 - Springer
Background Corynebacterium glutamicum is an important industrial workhorse and
advanced genetic engineering tools are urgently demanded. Recently, the clustered …