Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow

TE Cruickshank, MW Hahn - Molecular ecology, 2014 - Wiley Online Library
The metaphor of 'genomic islands of speciation'was first used to describe heterogeneous
differentiation among loci between the genomes of closely related species. The biological …

Genomics and the challenging translation into conservation practice

ABA Shafer, JBW Wolf, PC Alves, L Bergström… - Trends in ecology & …, 2015 - cell.com
The global loss of biodiversity continues at an alarming rate. Genomic approaches have
been suggested as a promising tool for conservation practice as scaling up to genome-wide …

[图书][B] Eco-evolutionary dynamics

AP Hendry - 2017 - degruyter.com
In recent years, scientists have realized that evolution can occur on timescales much shorter
than the" long lapse of ages" emphasized by Darwin—in fact, evolutionary change is …

[图书][B] Ecological speciation

P Nosil - 2012 - books.google.com
The origin of biological diversity, via the formation of new species, can be inextricably linked
to adaptation to the ecological environment. Specifically, ecological processes are central to …

Evaluating the use of ABBA–BABA statistics to locate introgressed loci

SH Martin, JW Davey, CD Jiggins - Molecular biology and …, 2015 - academic.oup.com
Several methods have been proposed to test for introgression across genomes. One method
tests for a genome-wide excess of shared derived alleles between taxa using Patterson's D …

Genome-wide evidence for speciation with gene flow in Heliconius butterflies

SH Martin, KK Dasmahapatra, NJ Nadeau… - Genome …, 2013 - genome.cshlp.org
Most speciation events probably occur gradually, without complete and immediate
reproductive isolation, but the full extent of gene flow between diverging species has rarely …

Coalescent-based species delimitation in an integrative taxonomy

MK Fujita, AD Leaché, FT Burbrink, JA McGuire… - Trends in ecology & …, 2012 - cell.com
The statistical rigor of species delimitation has increased dramatically over the past decade.
Coalescent theory provides powerful models for population genetic inference, and is now …

The spectre of too many species

AD Leaché, T Zhu, B Rannala, Z Yang - Systematic Biology, 2019 - academic.oup.com
Recent simulation studies examining the performance of Bayesian species delimitation as
implemented in the bpp program have suggested that bpp may detect population splits but …

Applications of next-generation sequencing to phylogeography and phylogenetics

JE McCormack, SM Hird, AJ Zellmer… - Molecular phylogenetics …, 2013 - Elsevier
This is a time of unprecedented transition in DNA sequencing technologies. Next-generation
sequencing (NGS) clearly holds promise for fast and cost-effective generation of multilocus …

The date of interbreeding between Neandertals and modern humans

S Sankararaman, N Patterson, H Li, S Pääbo, D Reich - 2012 - journals.plos.org
Comparisons of DNA sequences between Neandertals and present-day humans have
shown that Neandertals share more genetic variants with non-Africans than with Africans …