High performance cellular level agent-based simulation with FLAME for the GPU
Driven by the availability of experimental data and ability to simulate a biological scale
which is of immediate interest, the cellular scale is fast emerging as an ideal candidate for …
which is of immediate interest, the cellular scale is fast emerging as an ideal candidate for …
Investigating biocomplexity through the agent-based paradigm
H Kaul, Y Ventikos - Briefings in Bioinformatics, 2015 - academic.oup.com
Capturing the dynamism that pervades biological systems requires a computational
approach that can accommodate both the continuous features of the system environment as …
approach that can accommodate both the continuous features of the system environment as …
Multi-compartmentalisation in the MAPK signalling pathway contributes to the emergence of oscillatory behaviour and to ultrasensitivity
A Shuaib, A Hartwell, E Kiss-Toth, M Holcombe - PloS one, 2016 - journals.plos.org
Signal transduction through the Mitogen Activated Protein Kinase (MAPK) pathways is
evolutionarily highly conserved. Many cells use these pathways to interpret changes to their …
evolutionarily highly conserved. Many cells use these pathways to interpret changes to their …
[PDF][PDF] A high performance framework for agent based pedestrian dynamics on gpu hardware
P Richmond, DM Romano - Proceedings of EUROSIS ESM, 2008 - academia.edu
Pedestrian simulations have recently focused on top-down implementations ignoring more
computationally intensive agent based dynamics. This paper presents a framework for agent …
computationally intensive agent based dynamics. This paper presents a framework for agent …
Respiratory healthcare by design: computational approaches bringing respiratory precision and personalised medicine closer to bedside
H Kaul - Morphologie, 2019 - Elsevier
Precision medicine represents a potentially powerful means to alleviate the growing burden
of chronic respiratory diseases. To realise its potential, however, we need a systems level …
of chronic respiratory diseases. To realise its potential, however, we need a systems level …
Massively parallel model of extended memory use in evolutionary game dynamics
AP Randles, DG Rand, C Lee… - 2013 IEEE 27th …, 2013 - ieeexplore.ieee.org
To study the emergence of cooperative behavior, we have developed a scalable parallel
framework for evolutionary game dynamics. This is a critical computational tool enabling …
framework for evolutionary game dynamics. This is a critical computational tool enabling …
[DOC][DOC] Parallel Cellular Level Agent Based Modelling with FLAME
Driven by the availability of experimental data and ability to simulate a biological scale
which is of immediate interest, the cellular scale is fast emerging as an ideal candidate for …
which is of immediate interest, the cellular scale is fast emerging as an ideal candidate for …
Flexible high performance agent based modelling on graphics card hardware
PA Richmond - 2010 - etheses.whiterose.ac.uk
Agent Based Modelling is a technique for computational simulation of complex interacting
systems, through the specification of the behaviour of a number of autonomous individuals …
systems, through the specification of the behaviour of a number of autonomous individuals …