Reactome pathway analysis to enrich biological discovery in proteomics data sets

R Haw, H Hermjakob, P D'Eustachio, L Stein - Proteomics, 2011 - Wiley Online Library
Abstract Reactome (http://www. reactome. org) is an open‐source, expert‐authored, peer‐
reviewed, manually curated database of reactions, pathways and biological processes. We …

Temporal proteomics reveal specific cell cycle oncoprotein downregulation by p97/VCP inhibition

F Wang, S Li, N Houerbi, TF Chou - Cell chemical biology, 2022 - cell.com
Targeting protein quality control (PQC) pathways using proteasome or p97/VCP inhibition
can effectively treat blood tumors. However, in solid tumors, only p97/VCP inhibitors are …

Strategies for pathway analysis using GWAS and WGS data

MJ White, BL Yaspan, OJ Veatch… - Current protocols in …, 2019 - Wiley Online Library
Single‐allele study designs, commonly used in genome‐wide association studies (GWAS)
as well as the more recently developed whole genome sequencing (WGS) studies, are a …

A system-level, molecular evolutionary analysis of mammalian phototransduction

BM Invergo, L Montanucci, H Laayouni… - BMC evolutionary …, 2013 - Springer
Background Visual perception is initiated in the photoreceptor cells of the retina via the
phototransduction system. This system has shown marked evolution during mammalian …

Distribution of events of positive selection and population differentiation in a metabolic pathway: the case of asparagine N-glycosylation

GM Dall'Olio, H Laayouni, P Luisi, M Sikora… - BMC evolutionary …, 2012 - Springer
Abstract Background Asparagine N-Glycosylation is one of the most important forms of
protein post-translational modification in eukaryotes. This metabolic pathway can be …

Strategies for pathway analysis from GWAS data

BL Yaspan, OJ Veatch - Current Protocols in Human Genetics, 2011 - Wiley Online Library
Genome‐wide association studies (GWAS) are a standard approach for investigating the
relationship of common variation within the human genome to a given phenotype of interest …

[图书][B] Natural selection: methods and applications

MA Fares - 2014 - books.google.com
This book summarizes the knowledge in the field of methods to identify signatures of natural
selection. A number of mathematical models and methods have been designed to identify …

O-Glicosilação com N-acetil-glucosamina (O-GlcNAc) e eventos que contribuem para a formação da placa aterosclerótica

AC Mendes - 2020 - teses.usp.br
A aterosclerose é uma condição patológica crônica e inflamatória que afeta artérias de
grande e médio calibre e representa um risco para desfechos clínicos como infarto do …

Compositions and methods for inhibition and targeting of p97

TF Chou, S Li, F Wang, N Houerbi - US Patent App. 17/982,901, 2023 - Google Patents
C12N15/113—Non-coding nucleic acids modulating the expression of genes, eg antisense
oligonucleotides; Antisense DNA or RNA; Triplex-forming oligonucleotides; Catalytic nucleic …

The network framework of molecular evolution

L Montanucci, H Laayouni… - … selection: methods and …, 2014 - api.taylorfrancis.com
The difficulty in the functional understanding of the genome lies not only in the high number
of functional elements but also in the fact that they interact in entangled pathways, giving rise …