Circulating microRNAs as potential biomarkers of infectious disease
CN Correia, NC Nalpas, KE McLoughlin… - Frontiers in …, 2017 - frontiersin.org
microRNAs (miRNAs) are a class of small non-coding endogenous RNA molecules that
regulate a wide range of biological processes by post-transcriptionally regulating gene …
regulate a wide range of biological processes by post-transcriptionally regulating gene …
Essential guidelines for computational method benchmarking
In computational biology and other sciences, researchers are frequently faced with a choice
between several computational methods for performing data analyses. Benchmarking …
between several computational methods for performing data analyses. Benchmarking …
SARTools: a DESeq2-and EdgeR-based R pipeline for comprehensive differential analysis of RNA-Seq data
H Varet, L Brillet-Guéguen, JY Coppée, MA Dillies - PloS one, 2016 - journals.plos.org
Background Several R packages exist for the detection of differentially expressed genes
from RNA-Seq data. The analysis process includes three main steps, namely normalization …
from RNA-Seq data. The analysis process includes three main steps, namely normalization …
NOREVA: normalization and evaluation of MS-based metabolomics data
Diverse forms of unwanted signal variations in mass spectrometry-based metabolomics data
adversely affect the accuracies of metabolic profiling. A variety of normalization methods …
adversely affect the accuracies of metabolic profiling. A variety of normalization methods …
Measurements methods for the development of MicroRNA-based tests for cancer diagnosis
F Precazzini, S Detassis, AS Imperatori… - International journal of …, 2021 - mdpi.com
Studies investigating microRNAs as potential biomarkers for cancer, immune-related
diseases, or cardiac pathogenic diseases, among others, have exponentially increased in …
diseases, or cardiac pathogenic diseases, among others, have exponentially increased in …
[HTML][HTML] The validity of circulating microRNAs in oncology: five years of challenges and contradictions
MicroRNAs (miRNAs) in circulation have received an increasing amount of interest as
potential minimal invasive diagnostic tools in oncology. Several diagnostic, prognostic and …
potential minimal invasive diagnostic tools in oncology. Several diagnostic, prognostic and …
Optimization of miRNA-seq data preprocessing
The past two decades of microRNA (miRNA) research has solidified the role of these small
non-coding RNAs as key regulators of many biological processes and promising biomarkers …
non-coding RNAs as key regulators of many biological processes and promising biomarkers …
[HTML][HTML] microRNA-guided diagnostics in clinical samples
miRNA-guided diagnostics is a powerful molecular approach for evaluating clinical samples
through miRNA detection and/or visualization. To date, this approach has been successfully …
through miRNA detection and/or visualization. To date, this approach has been successfully …
Identification of tubular injury microRNA biomarkers in urine: comparison of next-generation sequencing and qPCR-based profiling platforms
Background MicroRNAs (miRNAs) are small, non-coding RNAs that regulate protein levels
post-transcriptionally. miRNAs play important regulatory roles in many cellular processes …
post-transcriptionally. miRNAs play important regulatory roles in many cellular processes …
QuickMIRSeq: a pipeline for quick and accurate quantification of both known miRNAs and isomiRs by jointly processing multiple samples from microRNA sequencing
Background Genome-wide miRNA expression data can be used to study miRNA
dysregulation comprehensively. Although many open-source tools for microRNA (miRNA) …
dysregulation comprehensively. Although many open-source tools for microRNA (miRNA) …