The origin and diversity of the HIV-1 pandemic

J Hemelaar - Trends in molecular medicine, 2012 - cell.com
This review examines the enormous progress that has been made in the past decade in
understanding the origin of HIV, HIV genetic variability, and the impact of global HIV diversity …

Tracking a century of global expansion and evolution of HIV to drive understanding and to combat disease

DM Tebit, EJ Arts - The Lancet infectious diseases, 2011 - thelancet.com
Since the isolation of HIV, multiple transmissions are thought to have occurred between man
and other old-world primates. Assessment of samples from apes and human beings with …

Fast dating using least-squares criteria and algorithms

TH To, M Jung, S Lycett, O Gascuel - Systematic biology, 2016 - academic.oup.com
Phylogenies provide a useful way to understand the evolutionary history of genetic samples,
and data sets with more than a thousand taxa are becoming increasingly common, notably …

The role of recombination in the emergence of a complex and dynamic HIV epidemic

M Zhang, B Foley, AK Schultz, JP Macke, I Bulla… - Retrovirology, 2010 - Springer
Background Inter-subtype recombinants dominate the HIV epidemics in three geographical
regions. To better understand the role of HIV recombinants in shaping the current HIV …

HIV genetic diversity and drug resistance

AF Santos, MA Soares - Viruses, 2010 - mdpi.com
Most of the current knowledge on antiretroviral (ARV) drug development and resistance is
based on the study of subtype B of HIV-1, which only accounts for 10% of the worldwide HIV …

Molecular epidemiology of HIV-1 subtypes in India: origin and evolutionary history of the predominant subtype C

U Neogi, I Bontell, A Shet, A De Costa, S Gupta… - PloS one, 2012 - journals.plos.org
Background India has the third largest HIV-1 epidemic with 2.4 million infected individuals.
Molecular epidemiological analysis has identified the predominance of HIV-1 subtype C …

[HTML][HTML] The increasing prevalence of HIV-1 subtype C in Southern Brazil and its dispersion through the continent

T Gräf, AR Pinto - Virology, 2013 - Elsevier
The HIV-1 has evolved swiftly and the scenario of HIV-1 genetic diversity is constantly
changing. In South America, recombinant forms of subtypes B, F1, and BF1 have historically …

HIV-1 molecular epidemiology in Guinea-Bissau, West Africa: origin, demography and migrations

J Esbjörnsson, M Mild, F Månsson, H Norrgren… - PloS one, 2011 - journals.plos.org
The HIV-1 epidemic in West Africa has been dominated by subtype A and the recombinant
form CRF02_AG. Little is known about the origins and the evolutionary history of HIV-1 in …

Brazilian network for HIV Drug Resistance Surveillance (HIVBresNet): a survey of treatmentnaive individuals

MB Arruda, LT Boullosa, CC Cardoso… - Journal of the …, 2018 - Wiley Online Library
Abstract Introduction In Brazil, more than 487,450 individuals are currently undergoing
antiretroviral treatment. In order to monitor the transmission of drugresistant strains and HIV …

Evolutionary dynamics of HIV-1 subtype C in Brazil

B Souto, V Triunfante, A Santos-Pereira, J Martins… - Scientific reports, 2021 - nature.com
The extensive genetic diversity of HIV-1 is a major challenge for the prevention and
treatment of HIV-1 infections. Subtype C accounts for most of the HIV-1 infections in the …