Evolution and genome architecture in fungal plant pathogens

M Möller, EH Stukenbrock - Nature Reviews Microbiology, 2017 - nature.com
The fungal kingdom comprises some of the most devastating plant pathogens. Sequencing
the genomes of fungal pathogens has shown a remarkable variability in genome size and …

How knowledge of pathogen population biology informs management of Septoria tritici blotch

BA McDonald, CC Mundt - Phytopathology, 2016 - Am Phytopath Society
Zymoseptoria tritici (previously Mycosphaerella graminicola) causes Septoria tritici blotch
(STB) on wheat. The population biology of Z. tritici has been exceptionally well characterized …

A small secreted protein in Zymoseptoria tritici is responsible for avirulence on wheat cultivars carrying the Stb6 resistance gene

Z Zhong, TC Marcel, FE Hartmann, X Ma… - New …, 2017 - Wiley Online Library
Zymoseptoria tritici is the causal agent of Septoria tritici blotch, a major pathogen of wheat
globally and the most damaging pathogen of wheat in Europe. A gene‐for‐gene (GFG) …

Stress-driven transposable element de-repression dynamics and virulence evolution in a fungal pathogen

S Fouché, T Badet, U Oggenfuss… - Molecular biology …, 2020 - academic.oup.com
Transposable elements (TEs) are drivers of genome evolution and affect the expression
landscape of the host genome. Stress is a major factor inducing TE activity; however, the …

Quantitative pathogenicity and host adaptation in a fungal plant pathogen revealed by whole-genome sequencing

R Amezrou, A Ducasse, J Compain, N Lapalu… - Nature …, 2024 - nature.com
Abstract Knowledge of genetic determinism and evolutionary dynamics mediating host-
pathogen interactions is essential to manage fungal plant diseases. Studies on the genetic …

Quantitative phenotyping of northern leaf blight in UAV images using deep learning

EL Stewart, T Wiesner-Hanks, N Kaczmar, C DeChant… - Remote Sensing, 2019 - mdpi.com
Plant disease poses a serious threat to global food security. Accurate, high-throughput
methods of quantifying disease are needed by breeders to better develop resistant plant …

A fungal avirulence factor encoded in a highly plastic genomic region triggers partial resistance to septoria tritici blotch

L Meile, D Croll, PC Brunner, C Plissonneau… - New …, 2018 - Wiley Online Library
Cultivar‐strain specificity in the wheat–Zymoseptoria tritici pathosystem determines the
infection outcome and is controlled by resistance genes on the host side, many of which …

Using population and comparative genomics to understand the genetic basis of effector-driven fungal pathogen evolution

C Plissonneau, J Benevenuto… - Frontiers in plant …, 2017 - frontiersin.org
Epidemics caused by fungal plant pathogens pose a major threat to agro-ecosystems and
impact global food security. High-throughput sequencing enabled major advances in …

Accessories make the outfit: accessory chromosomes and other dispensable DNA regions in plant-pathogenic fungi

S Bertazzoni, AH Williams, DA Jones… - Molecular Plant …, 2018 - Am Phytopath Society
Fungal pathogen genomes can often be divided into core and accessory regions. Accessory
regions ARs) may be comprised of either ARs (within core chromosomes (CCs) or wholly …

Characterization of effector–target interactions in necrotrophic pathosystems reveals trends and variation in host manipulation

TL Friesen, JD Faris - Annual review of phytopathology, 2021 - annualreviews.org
Great strides have been made in defining the details of the plant defense response involving
biotrophic fungal and bacterial pathogens. The groundwork for the current model was laid by …