[HTML][HTML] Integrated web visualizations for protein-protein interaction databases

F Jeanquartier, C Jean-Quartier, A Holzinger - BMC bioinformatics, 2015 - Springer
Background Understanding living systems is crucial for curing diseases. To achieve this task
we have to understand biological networks based on protein-protein interactions …

Exploration and discovery of the COVID-19 literature through semantic visualization

J Tu, M Verhagen, B Cochran, J Pustejovsky - arXiv preprint arXiv …, 2020 - arxiv.org
We are developing semantic visualization techniques in order to enhance exploration and
enable discovery over large datasets of complex networks of relations. Semantic …

[HTML][HTML] A web-based protein interaction network visualizer

GA Salazar, A Meintjes, GK Mazandu, HA Rapanoël… - BMC …, 2014 - Springer
Background Interaction between proteins is one of the most important mechanisms in the
execution of cellular functions. The study of these interactions has provided insight into the …

INTERSPIA: a web application for exploring the dynamics of protein-protein interactions among multiple species

D Kwon, D Lee, J Kim, J Lee, M Sim… - Nucleic Acids …, 2018 - academic.oup.com
Proteins perform biological functions through cascading interactions with each other by
forming protein complexes. As a result, interactions among proteins, called protein-protein …

[HTML][HTML] phylo-node: A molecular phylogenetic toolkit using Node.js

DM O'Halloran - Plos one, 2017 - journals.plos.org
Background Node. js is an open-source and cross-platform environment that provides a
JavaScript codebase for back-end server-side applications. JavaScript has been used to …

[HTML][HTML] The BioJS article collection of open source components for biological data visualisation

M Corpas - F1000Research, 2014 - ncbi.nlm.nih.gov
Data-driven research has gained momentum in the life sciences. Visualisation of these data
is essential for quick generation of hypotheses and their translation into useful knowledge …

Using INTERSPIA to Explore the Dynamics of Protein‐Protein Interactions Among Multiple Species

D Kwon, D Lee, J Kim, J Lee, M Sim… - Current Protocols in …, 2019 - Wiley Online Library
Abstract INTER‐Species Protein Interaction Analysis (INTERSPIA) is a web application for
identifying diverse patterns of protein‐protein interactions (PPIs) in different species. Given a …