[HTML][HTML] Integrating cellular electron microscopy with multimodal data to explore biology across space and time

CL McCafferty, S Klumpe, RE Amaro, W Kukulski… - Cell, 2024 - cell.com
Biology spans a continuum of length and time scales. Individual experimental methods only
glimpse discrete pieces of this spectrum but can be combined to construct a more holistic …

Expanding insights from in situ cryo-EM

J Hutchings, E Villa - Current Opinion in Structural Biology, 2024 - Elsevier
The combination of cryo-electron tomography and subtomogram analysis affords 3D high-
resolution views of biological macromolecules in their native cellular environment, or in situ …

Baited reconstruction with 2D template matching for high-resolution structure determination in vitro and in vivo without template bias

BA Lucas, BA Himes, N Grigorieff - Elife, 2023 - elifesciences.org
Previously we showed that 2D template matching (2DTM) can be used to localize
macromolecular complexes in images recorded by cryogenic electron microscopy (cryo-EM) …

Structural dynamics of human ribosomes in situ reconstructed by exhaustive high-resolution template matching

JP Rickgauer, H Choi, AS Moore, W Denk… - Molecular Cell, 2024 - cell.com
Protein synthesis is central to life and requires the ribosome, which catalyzes the stepwise
addition of amino acids to a polypeptide chain by undergoing a sequence of structural …

[HTML][HTML] PyTME (Python Template Matching Engine): A fast, flexible, and multi-purpose template matching library for cryogenic electron microscopy data

VJ Maurer, M Siggel, J Kosinski - SoftwareX, 2024 - Elsevier
Cryogenic electron microscopy (cryo-EM) is a key method in structural and cell biology.
Analysis of cryo-EM images requires interpretation of noisy, low-resolution densities, which …

[HTML][HTML] Understanding the cell: Future views of structural biology

M Beck, R Covino, I Hänelt, M Müller-McNicoll - Cell, 2024 - cell.com
Determining the structure and mechanisms of all individual functional modules of cells at
high molecular detail has often been seen as equal to understanding how cells work …

[HTML][HTML] New insights into the molecular architecture of neurons by cryo-electron tomography

A Petrovic, TT Do, R Fernández-Busnadiego - Current Opinion in …, 2025 - Elsevier
Highlights•In situ cryo-ET provides novel mechanistic insights into neuronal biology.•Cryo-
ET enables cellular structural studies of neurodegeneration.•Recent developments allow …

Nuclear pore permeability and fluid flow are modulated by its dilation state

PC Hoffmann, H Kim, A Obarska-Kosinska, JP Kreysing… - Molecular Cell, 2024 - cell.com
Changing environmental conditions necessitate rapid adaptation of cytoplasmic and nuclear
volumes. We use the slime mold Dictyostelium discoideum, known for its ability to tolerate …

Bridging structural biology and clinical research through in-tissue cryo-electron tomography

K Kixmoeller, BC Creekmore, EB Lee… - The EMBO …, 2024 - embopress.org
Structural biology is a field of research that investigates the structure and organization of
macromolecules to decipher their functional mechanisms. Traditionally, it has adopted a …

MolecularWebXR: Multiuser discussions about chemistry and biology in immersive and inclusive VR

FJC Rodríguez, G Frattini, FTP Meireles… - arXiv preprint arXiv …, 2023 - arxiv.org
MolecularWebXR is our new website for education, science communication and scientific
peer discussion in chemistry and biology built on WebXR. It democratizes multi-user …