Impact of transposable elements on the organization and function of allopolyploid genomes

C Parisod, K Alix, J Just, M Petit, V Sarilar… - New …, 2010 - Wiley Online Library
Transposable elements (TEs) represent an important fraction of plant genomes and are
likely to play a pivotal role in fuelling genome reorganization and functional changes …

Cytogenetics and genome analysis in Brassica crops

RJ Snowdon - Chromosome Research, 2007 - Springer
The genus Brassica contains a wide range of diploid and amphipolyploid species including
some of the most important vegetable, condiment and oilseed crops worldwide. As members …

Polyploidy: pitfalls and paths to a paradigm

DE Soltis, CJ Visger, DB Marchant… - American journal of …, 2016 - Wiley Online Library
Investigators have long searched for a polyploidy paradigm—rules or principles that might
be common following polyploidization (wholegenome duplication, WGD). Here we attempt …

iPBS: a universal method for DNA fingerprinting and retrotransposon isolation

R Kalendar, K Antonius, P Smýkal… - Theoretical and Applied …, 2010 - Springer
Molecular markers are essential in plant and animal breeding and biodiversity applications,
in human forensics, and for map-based cloning of genes. The long terminal repeat (LTR) …

Mobilization of retrotransposons in synthetic allotetraploid tobacco

M Petit, C Guidat, J Daniel, E Denis… - New …, 2010 - Wiley Online Library
Allopolyploidy is a major driving force in plant evolution and can induce rapid structural
changes in the hybrid genome. As major components of plant genomes, transposable …

A and C Genome Distinction and Chromosome Identification in Brassica napus by Sequential Fluorescence in Situ Hybridization and Genomic in Situ Hybridization

EC Howell, MJ Kearsey, GH Jones, GJ King… - Genetics, 2008 - academic.oup.com
The two genomes (A and C) of the allopolyploid Brassica napus have been clearly
distinguished using genomic in situ hybridization (GISH) despite the fact that the two extant …

Allopolyploidy has a moderate impact on restructuring at three contrasting transposable element insertion sites in resynthesized Brassica napus allotetraploids

V Sarilar, PM Palacios, A Rousselet, C Ridel… - New …, 2013 - Wiley Online Library
The role played by wholegenome duplication (WGD) in evolution and adaptation is
particularly well illustrated in allopolyploids, where WGD is concomitant with interspecific …

Transposable elements and microevolutionary changes in natural populations

G Bonchev, C Parisod - Molecular Ecology Resources, 2013 - Wiley Online Library
Transposable elements (TE s) usually represent the most abundant and dynamic fraction of
genomes in almost all living organisms. The overall capacity of such 'junk DNA'to induce …

The genomic shock hypothesis: genetic and epigenetic alterations of transposable elements after interspecific hybridization in plants

C de Tomás, CM Vicient - Epigenomes, 2023 - mdpi.com
Transposable elements (TEs) are major components of plant genomes with the ability to
change their position in the genome or to create new copies of themselves in other positions …

The CACTA transposon Bot1 played a major role in Brassica genome divergence and gene proliferation

K Alix, J Joets, CD Ryder, J Moore, GC Barker… - The Plant …, 2008 - Wiley Online Library
We isolated and characterized a Brassica C genomespecific CACTA element, which was
designated Bot1 (Brassica oleracea transposon 1). After analysing phylogenetic …