Optimization of metabolomic data processing using NOREVA

J Fu, Y Zhang, Y Wang, H Zhang, J Liu, J Tang… - Nature protocols, 2022 - nature.com
A typical output of a metabolomic experiment is a peak table corresponding to the intensity
of measured signals. Peak table processing, an essential procedure in metabolomics, is …

Review of recent developments in GC–MS approaches to metabolomics-based research

DJ Beale, FR Pinu, KA Kouremenos, MM Poojary… - Metabolomics, 2018 - Springer
Background Metabolomics aims to identify the changes in endogenous metabolites of
biological systems in response to intrinsic and extrinsic factors. This is accomplished …

Loss of attachment promotes proline accumulation and excretion in cancer cells

SE Pilley, M Hennequart, A Vandekeere, J Blagih… - Science …, 2023 - science.org
Previous studies have revealed a role for proline metabolism in supporting cancer
development and metastasis. In this study, we show that many cancer cells respond to loss …

Defining blood plasma and serum metabolome by GC-MS

O Kiseleva, I Kurbatov, E Ilgisonis, E Poverennaya - Metabolites, 2021 - mdpi.com
Metabolomics uses advanced analytical chemistry methods to analyze metabolites in
biological samples. The most intensively studied samples are blood and its liquid …

Sengers syndrome-associated mitochondrial acylglycerol kinase is a subunit of the human TIM22 protein import complex

Y Kang, DA Stroud, MJ Baker, DP De Souza… - Molecular cell, 2017 - cell.com
Acylglycerol kinase (AGK) is a mitochondrial lipid kinase that catalyzes the phosphorylation
of monoacylglycerol and diacylglycerol to lysophosphatidic acid and phosphatidic acid …

eRah: a computational tool integrating spectral deconvolution and alignment with quantification and identification of metabolites in GC/MS-based metabolomics

X Domingo-Almenara, J Brezmes, M Vinaixa… - Analytical …, 2016 - ACS Publications
Gas chromatography coupled to mass spectrometry (GC/MS) has been a long-standing
approach used for identifying small molecules due to the highly reproducible ionization …

Computational mass spectrometry for small molecules

K Scheubert, F Hufsky, S Böcker - Journal of cheminformatics, 2013 - Springer
The identification of small molecules from mass spectrometry (MS) data remains a major
challenge in the interpretation of MS data. This review covers the computational aspects of …

[HTML][HTML] From untargeted chemical profiling to peak tables–A fully automated AI driven approach to untargeted GC-MS

G Baccolo, B Quintanilla-Casas, S Vichi… - TrAC Trends in …, 2021 - Elsevier
Gas chromatography–mass spectrometry (GC-MS) is an important tool in contemporary
untargeted chemical analysis, where the batch analysis of sample series and subsequent …

The draft genome of blunt snout bream (Megalobrama amblycephala) reveals the development of intermuscular bone and adaptation to herbivorous diet

H Liu, C Chen, Z Gao, J Min, Y Gu, J Jian, X Jiang… - …, 2017 - academic.oup.com
The blunt snout bream Megalobrama amblycephala is the economically most important
cyprinid fish species. As an herbivore, it can be grown by eco-friendly and resource …

[PDF][PDF] Metabolomics, a potential way to improve abiotic stresses tolerance in cereal crops.

MU Noman, S Azhar - 2023 - ijagbio.com
Rapid Climate change is causing the highly diversified effect on both quantity and quality in
extensive area crops. All abiotic stresses are based on ecological conditions due to any …