miRNA biogenesis: a dynamic pathway

NP Achkar, DA Cambiagno, PA Manavella - Trends in Plant Science, 2016 - cell.com
MicroRNAs (miRNAs) modulate plant homeostasis through the inactivation of specific
mRNAs, especially those encoding transcription factors. A delicate spatial/temporal balance …

Specialization and evolution of endogenous small RNA pathways

EJ Chapman, JC Carrington - Nature Reviews Genetics, 2007 - nature.com
The specificity of RNA silencing is conferred by small RNA guides that are processed from
structured RNA or dsRNA. The core components for small RNA biogenesis and effector …

[HTML][HTML] Identification of nuclear dicing bodies containing proteins for microRNA biogenesis in living Arabidopsis plants

Y Fang, DL Spector - Current Biology, 2007 - cell.com
MicroRNAs (miRNAs) are important for regulating gene expression in muticellular
organisms. MiRNA processing is a two-step process. In animal cells, the first step is nuclear …

Role of small RNAs in host-microbe interactions

S Katiyar-Agarwal, H Jin - Annual review of phytopathology, 2010 - annualreviews.org
Plant defense responses against pathogens are mediated by activation and repression of a
large array of genes. Host endogenous small RNAs are essential in this gene expression …

Comparative transcriptomics of Arabidopsis sperm cells

F Borges, G Gomes, R Gardner, N Moreno… - Plant …, 2008 - academic.oup.com
In flowering plants, the two sperm cells are embedded within the cytoplasm of the growing
pollen tube and as such are passively transported to the embryo sac, wherein double …

Suppression of methylation-mediated transcriptional gene silencing by βC1-SAHH protein interaction during geminivirus-betasatellite infection

X Yang, Y Xie, P Raja, S Li, JN Wolf, Q Shen… - PLoS …, 2011 - journals.plos.org
DNA methylation is a fundamental epigenetic modification that regulates gene expression
and represses endogenous transposons and invading DNA viruses. As a counter-defense …

Plant E3 ligases: flexible enzymes in a sessile world

L Chen, H Hellmann - Molecular Plant, 2013 - cell.com
Since its discovery in the late 1970s, the ubiquitin proteasome pathway appears to be
omnipresent in many research fields. Although originally discovered in animals, the pathway …

Argonaute quenching and global changes in Dicer homeostasis caused by a pathogen-encoded GW repeat protein

J Azevedo, D Garcia, D Pontier… - Genes & …, 2010 - genesdev.cshlp.org
In plants and invertebrates, viral-derived siRNAs processed by the RNaseIII Dicer guide
Argonaute (AGO) proteins as part of antiviral RNA-induced silencing complexes (RISC). As …

Reconstructing de novo silencing of an active plant retrotransposon

A Marí-Ordóñez, A Marchais, M Etcheverry, A Martin… - Nature …, 2013 - nature.com
Transposable elements (TEs) contribute to genome size, organization and evolution. In
plants, their activity is primarily controlled by transcriptional gene silencing (TGS), usually …

Plant dicer-like proteins: double-stranded RNA-cleaving enzymes for small RNA biogenesis

A Fukudome, T Fukuhara - Journal of Plant Research, 2017 - Springer
Dicer, a double-stranded RNA (dsRNA)-specific endoribonuclease, plays an essential role
in triggering both transcriptional and post-transcriptional gene silencing in eukaryotes by …