Methods for cell and particle tracking

E Meijering, O Dzyubachyk, I Smal - Methods in enzymology, 2012 - Elsevier
Achieving complete understanding of any living thing inevitably requires thorough analysis
of both its anatomic and dynamic properties. Live-cell imaging experiments carried out to …

Tracking in cell and developmental biology

E Meijering, O Dzyubachyk, I Smal… - Seminars in cell & …, 2009 - Elsevier
The past decade has seen an unprecedented data explosion in biology. It has become
evident that in order to take full advantage of the potential wealth of information hidden in the …

Advanced level-set-based cell tracking in time-lapse fluorescence microscopy

O Dzyubachyk, WA Van Cappellen… - IEEE transactions on …, 2010 - ieeexplore.ieee.org
Cell segmentation and tracking in time-lapse fluorescence microscopy images is a task of
fundamental importance in many biological studies on cell migration and proliferation. In …

Quantitative comparison of spot detection methods in fluorescence microscopy

I Smal, M Loog, W Niessen… - IEEE transactions on …, 2009 - ieeexplore.ieee.org
Quantitative analysis of biological image data generally involves the detection of many
subresolution spots. Especially in live cell imaging, for which fluorescence microscopy is …

3-D active meshes: fast discrete deformable models for cell tracking in 3-D time-lapse microscopy

A Dufour, R Thibeaux, E Labruyere… - IEEE transactions on …, 2010 - ieeexplore.ieee.org
Variational deformable models have proven over the past decades a high efficiency for
segmentation and tracking in 2-D sequences. Yet, their application to 3-D time-lapse images …

Dynein-dependent processive chromosome motions promote homologous pairing in C. elegans meiosis

DJ Wynne, O Rog, PM Carlton, AF Dernburg - Journal of Cell Biology, 2012 - rupress.org
Meiotic chromosome segregation requires homologue pairing, synapsis, and crossover
recombination, which occur during meiotic prophase. Telomere-led chromosome motion has …

[HTML][HTML] Introduction to the quantitative analysis of two-dimensional fluorescence microscopy images for cell-based screening

V Ljosa, AE Carpenter - PLoS computational biology, 2009 - journals.plos.org
Modern automated microscopes collect digital images at an astonishing pace. Automated
image analysis can measure biological phenotypes quantitatively and reliably, and has …

[HTML][HTML] Significantly improved precision of cell migration analysis in time-lapse video microscopy through use of a fully automated tracking system

J Huth, M Buchholz, JM Kraus, M Schmucker… - BMC cell biology, 2010 - Springer
Background Cell motility is a critical parameter in many physiological as well as
pathophysiological processes. In time-lapse video microscopy, manual cell tracking remains …

TimeLapseAnalyzer: multi-target analysis for live-cell imaging and time-lapse microscopy

J Huth, M Buchholz, JM Kraus, K Mølhave… - Computer methods and …, 2011 - Elsevier
The direct observation of cells over time using time-lapse microscopy can provide deep
insights into many important biological processes. Reliable analyses of motility, proliferation …

Compact multi-band fluorescent microscope with an electrically tunable lens for autofocusing

Z Wang, M Lei, B Yao, Y Cai, Y Liang… - Biomedical optics …, 2015 - opg.optica.org
Autofocusing is a routine technique in redressing focus drift that occurs in time-lapse
microscopic image acquisition. To date, most automatic microscopes are designed on the …