[HTML][HTML] The application of long-read sequencing in clinical settings
Long-read DNA sequencing technologies have been rapidly evolving in recent years, and
their ability to assess large and complex regions of the genome makes them ideal for clinical …
their ability to assess large and complex regions of the genome makes them ideal for clinical …
[HTML][HTML] SARS-CoV-2 variants identification: overview of molecular existing methods
Since the beginning of COVID-19 pandemic the Real Time sharing of genome sequences of
circulating virus supported the diagnostics and surveillance of SARS-CoV-2 and its …
circulating virus supported the diagnostics and surveillance of SARS-CoV-2 and its …
[HTML][HTML] Minimal requirements for ISO15189 validation and accreditation of three next generation sequencing procedures for SARS-CoV-2 surveillance in clinical …
C Maschietto, G Otto, P Rouzé, N Debortoli, B Bihin… - Scientific reports, 2023 - nature.com
Rapid and recurrent breakthroughs of new SARS-CoV-2 strains (variants) have prompted
public health authorities worldwide to set up surveillance networks to monitor the circulation …
public health authorities worldwide to set up surveillance networks to monitor the circulation …
[HTML][HTML] An evaluation of avian influenza virus whole-genome sequencing approaches using nanopore technology
As exemplified by the global response to the SARS-CoV-2 pandemic, whole-genome
sequencing played an important role in monitoring the evolution of novel viral variants and …
sequencing played an important role in monitoring the evolution of novel viral variants and …
[HTML][HTML] Molecular epidemiology and diversity of SARS-CoV-2 in Ethiopia, 2020–2022
A Sisay, D Tshiabuila, S van Wyk, A Tesfaye… - Genes, 2023 - mdpi.com
Ethiopia is the second most populous country in Africa and the sixth most affected by COVID-
19 on the continent. Despite having experienced five infection waves,> 499,000 cases, and …
19 on the continent. Despite having experienced five infection waves,> 499,000 cases, and …
[HTML][HTML] Comparison of Nanopore and Synthesis-Based Next-Generation Sequencing Platforms for SARS-CoV-2 Variant Monitoring in Wastewater
D Garcia-Pedemonte, A Carcereny, J Gregori… - International Journal of …, 2023 - mdpi.com
Shortly after the beginning of the SARS-CoV-2 pandemic, many countries implemented
sewage sentinel systems to monitor the circulation of the virus in the population. A …
sewage sentinel systems to monitor the circulation of the virus in the population. A …
Nanopore sequencing technology and its applications
P Zheng, C Zhou, Y Ding, B Liu, L Lu, F Zhu… - MedComm, 2023 - Wiley Online Library
Since the development of Sanger sequencing in 1977, sequencing technology has played a
pivotal role in molecular biology research by enabling the interpretation of biological genetic …
pivotal role in molecular biology research by enabling the interpretation of biological genetic …
[HTML][HTML] FAIR+ E pathogen data for surveillance and research: lessons from COVID-19
The COVID-19 pandemic has exemplified the importance of interoperable and equitable
data sharing for global surveillance and to support research. While many challenges could …
data sharing for global surveillance and to support research. While many challenges could …
[HTML][HTML] Sequencing methods for HA and NA genes of avian influenza viruses from wild bird feces using Oxford Nanopore sequencing
K Nabeshima, S Asakura, R Iwata, H Honjo… - … and Infectious Diseases, 2023 - Elsevier
We developed a method to determine the sequences of hemagglutinin (HA) and
neuraminidase (NA) from RNA extracted directly from wild bird fecal samples, using …
neuraminidase (NA) from RNA extracted directly from wild bird fecal samples, using …
Advancing disease genomics beyond COVID-19 and reducing health disparities: what does the future hold for Africa?
C Ibe, AA Otu, NP Mnyambwa - Briefings in Functional …, 2023 - academic.oup.com
The COVID-19 pandemic has ushered in high-throughput sequencing technology as an
essential public health tool. Scaling up and operationalizing genomics in Africa is crucial as …
essential public health tool. Scaling up and operationalizing genomics in Africa is crucial as …