Fast activation maximization for molecular sequence design
Background Optimization of DNA and protein sequences based on Machine Learning
models is becoming a powerful tool for molecular design. Activation maximization offers a …
models is becoming a powerful tool for molecular design. Activation maximization offers a …
Fast differentiable DNA and protein sequence optimization for molecular design
Designing DNA and protein sequences with improved function has the potential to greatly
accelerate synthetic biology. Machine learning models that accurately predict biological …
accelerate synthetic biology. Machine learning models that accurately predict biological …
DNA strand generation for DNA computing by using a multi-objective differential evolution algorithm
JM Chaves-Gonzalez, MA Vega-Rodriguez - Biosystems, 2014 - Elsevier
In this paper, we use an adapted multi-objective version of the differential evolution (DE)
metaheuristics for the design and generation of reliable DNA libraries that can be used for …
metaheuristics for the design and generation of reliable DNA libraries that can be used for …
A multiobjective swarm intelligence approach based on artificial bee colony for reliable DNA sequence design
JM Chaves-González, MA Vega-Rodríguez… - … Applications of Artificial …, 2013 - Elsevier
The design of reliable DNA sequences is crucial in many engineering applications which
depend on DNA-based technologies, such as nanotechnology or DNA computing. In these …
depend on DNA-based technologies, such as nanotechnology or DNA computing. In these …
A multiobjective approach based on the behavior of fireflies to generate reliable DNA sequences for molecular computing
JM Chaves-González, MA Vega-Rodríguez - Applied Mathematics and …, 2014 - Elsevier
The reliability of artificially generated DNA molecules is a key factor for applications which
depend on DNA-based technologies, such as DNA computing or nanotechnology. In those …
depend on DNA-based technologies, such as DNA computing or nanotechnology. In those …
An efficient design for a multi-objective evolutionary algorithm to generate DNA libraries suitable for computation
JM Chaves-González, J Martínez-Gil - … Sciences: Computational Life …, 2019 - Springer
The design of reliable DNA libraries that can be used for bio-molecular computing involves
several heterogeneous conflicting design criteria that traditional optimization approaches do …
several heterogeneous conflicting design criteria that traditional optimization approaches do …
A Study on the Parameter Selection of Bat Algorithm in in Optimizing Parameters in Camera Auto Calibration Problem
RM Said, KAA Aziz, AFZ Abidin… - … Journal of Intelligent …, 2022 - journal.ump.edu.my
In camera auto calibration, the major goal is to discover intrinsic parameter values that
minimize the cost function. This study proposes to implement Bat algorithm, a stochastic …
minimize the cost function. This study proposes to implement Bat algorithm, a stochastic …
Job scheduling using ant colony optimization in grid environment
A Chhabra - 2016 International Conference on Electrical …, 2016 - ieeexplore.ieee.org
Grid computing proposes a dynamic and earthly distributed organization of resources that
harvest ideal CPU cycle to drift advance computing demands and accommodate user's …
harvest ideal CPU cycle to drift advance computing demands and accommodate user's …
Hybrid multiobjective metaheuristics for the design of reliable DNA libraries
JM Chaves-González - Journal of Heuristics, 2015 - Springer
DNA-based technologies, such as nanotechnology, DNA sequencing or DNA computing,
have grown significantly in recent years. The inherent properties presented in DNA …
have grown significantly in recent years. The inherent properties presented in DNA …
DNA sequence design for reliable DNA computing by using a multiobjective approach
JM Chaves-González… - 2012 IEEE 13th …, 2012 - ieeexplore.ieee.org
In DNA computing, the design of reliable DNA sequences is one of the most important tasks,
because sequences used for that purpose have to fulfill several biochemical restrictions to …
because sequences used for that purpose have to fulfill several biochemical restrictions to …