RADseq approaches and applications for forest tree genetics
As tree species vary extensively in genome size, complexity, and resource development,
reduced representation methods have been increasingly employed for the generation of …
reduced representation methods have been increasingly employed for the generation of …
A key metabolic gene for recurrent freshwater colonization and radiation in fishes
Colonization of new ecological niches has triggered large adaptive radiations. Although
some lineages have made use of such opportunities, not all do so. The factors causing this …
some lineages have made use of such opportunities, not all do so. The factors causing this …
[HTML][HTML] Genome sequence and analysis of the Japanese morning glory Ipomoea nil
A Hoshino, V Jayakumar, E Nitasaka, A Toyoda… - Nature …, 2016 - nature.com
Ipomoea is the largest genus in the family Convolvulaceae. Ipomoea nil (Japanese morning
glory) has been utilized as a model plant to study the genetic basis of floricultural traits, with …
glory) has been utilized as a model plant to study the genetic basis of floricultural traits, with …
[HTML][HTML] Genome editing reveals fitness effects of a gene for sexual dichromatism in Sulawesian fishes
S Ansai, K Mochida, S Fujimoto… - Nature …, 2021 - nature.com
Sexual selection drives rapid phenotypic diversification of mating traits. However, we know
little about the causative genes underlying divergence in sexually selected traits. Here, we …
little about the causative genes underlying divergence in sexually selected traits. Here, we …
[HTML][HTML] Association analysis of production traits of Japanese quail (Coturnix japonica) using restriction-site associated DNA sequencing
MI Haqani, M Nakano, AJ Nagano, Y Nakamura… - Scientific Reports, 2023 - nature.com
This study was designed to perform an association analysis and identify SNP markers
associated with production traits of Japanese quail using restriction-site-associated DNA …
associated with production traits of Japanese quail using restriction-site-associated DNA …
Mutation in the putative ketoacyl-ACP reductase CaKR1 induces loss of pungency in Capsicum
Key message A putative ketoacyl-ACP reductase (CaKR1) that was not previously known to
be associated with pungency of Capsicum was identified from map-based cloning and …
be associated with pungency of Capsicum was identified from map-based cloning and …
[HTML][HTML] RAD-Seq analysis of wild Japanese garlic (Allium macrostemon Bunge) growing in Japan revealed that this neglected crop was previously actively utilized
W Probowati, S Koga, K Harada, Y Nagano… - Scientific Reports, 2023 - nature.com
Allium macrostemon Bunge, commonly referred to as" no-biru" in Japan, is a widespread
wild onion species found across the country. Despite being deeply entwined in ancient …
wild onion species found across the country. Despite being deeply entwined in ancient …
[HTML][HTML] Genetic diversity of loquat (Eriobotrya japonica) revealed using RAD-Seq SNP markers
Y Nagano, H Tashiro, S Nishi, N Hiehata… - Scientific Reports, 2022 - nature.com
Loquat (Eriobotrya japonica) have originated in southeastern China and spread as a
cultivated plant worldwide. Many of the loquat genetic resources collected internationally are …
cultivated plant worldwide. Many of the loquat genetic resources collected internationally are …
[HTML][HTML] Domesticating Vigna stipulacea: Chromosome-Level genome assembly reveals VsPSAT1 as a candidate gene decreasing hard-seededness
Y Takahashi, H Sakai, H Ariga, S Teramoto… - Frontiers in Plant …, 2023 - frontiersin.org
To increase food production under the challenges presented by global climate change, the
concept of de novo domestication—utilizing stress-tolerant wild species as new crops—has …
concept of de novo domestication—utilizing stress-tolerant wild species as new crops—has …
[HTML][HTML] RAD-seq reveals genetic structure of the F2-generation of natural willow hybrids (Salix L.) and a great potential for interspecific introgression
S Gramlich, ND Wagner, E Hörandl - BMC Plant Biology, 2018 - Springer
Background Hybridization of species with porous genomes can eventually lead to
introgression via repeated backcrossing. The potential for introgression between species is …
introgression via repeated backcrossing. The potential for introgression between species is …