Mechanisms and regulation of alternative pre-mRNA splicing
Y Lee, DC Rio - Annual review of biochemistry, 2015 - annualreviews.org
Precursor messenger RNA (pre-mRNA) splicing is a critical step in the posttranscriptional
regulation of gene expression, providing significant expansion of the functional proteome of …
regulation of gene expression, providing significant expansion of the functional proteome of …
[HTML][HTML] Pre-mRNA processing reaches back totranscription and ahead to translation
MJ Moore, NJ Proudfoot - Cell, 2009 - cell.com
The pathway from gene activation in the nucleus to mRNA translation and decay at specific
locations in the cytoplasm is both streamlined and highly interconnected. This review …
locations in the cytoplasm is both streamlined and highly interconnected. This review …
[PDF][PDF] Splicing of nascent RNA coincides with intron exit from RNA polymerase II
Protein-coding genes in eukaryotes are transcribed by RNA polymerase II (Pol II) and
introns are removed from pre-mRNA by the spliceosome. Understanding the time lag …
introns are removed from pre-mRNA by the spliceosome. Understanding the time lag …
[HTML][HTML] The centrality of RNA
PA Sharp - Cell, 2009 - cell.com
New roles for RNAs in biology continue to emerge, and a glance at the history of RNAs may
prepare molecular biologists for future discoveries about these powerful molecules. A …
prepare molecular biologists for future discoveries about these powerful molecules. A …
[HTML][HTML] Post-transcriptional spliceosomes are retained in nuclear speckles until splicing completion
C Girard, CL Will, J Peng, EM Makarov… - Nature …, 2012 - nature.com
There is little quantitative information regarding how much splicing occurs co-
transcriptionally in higher eukaryotes, and it remains unclear where precisely splicing occurs …
transcriptionally in higher eukaryotes, and it remains unclear where precisely splicing occurs …
Nascent-seq indicates widespread cotranscriptional pre-mRNA splicing in Drosophila
To determine the prevalence of cotranscriptional splicing in Drosophila, we sequenced
nascent RNA transcripts from Drosophila S2 cells as well as from Drosophila heads. Eighty …
nascent RNA transcripts from Drosophila S2 cells as well as from Drosophila heads. Eighty …
Chemistry and biology of self-cleaving ribozymes
RM Jimenez, JA Polanco, A Lupták - Trends in biochemical sciences, 2015 - cell.com
Self-cleaving ribozymes were discovered 30 years ago, but their biological distribution and
catalytic mechanisms are only beginning to be defined. Each ribozyme family is defined by a …
catalytic mechanisms are only beginning to be defined. Each ribozyme family is defined by a …
The splicing factor SC35 has an active role in transcriptional elongation
S Lin, G Coutinho-Mansfield, D Wang… - Nature structural & …, 2008 - nature.com
Mounting evidence suggests that transcription and RNA processing are intimately coupled
in vivo, although each process can occur independently in vitro. It is generally thought that …
in vivo, although each process can occur independently in vitro. It is generally thought that …
Co-transcriptional gene regulation in eukaryotes and prokaryotes
M Shine, J Gordon, L Schärfen, D Zigackova… - … Reviews Molecular Cell …, 2024 - nature.com
Many steps of RNA processing occur during transcription by RNA polymerases. Co-
transcriptional activities are deemed commonplace in prokaryotes, in which the lack of …
transcriptional activities are deemed commonplace in prokaryotes, in which the lack of …
[PDF][PDF] SR proteins function in coupling RNAP II transcription to pre-mRNA splicing
R Das, J Yu, Z Zhang, MP Gygi, AR Krainer, SP Gygi… - Molecular cell, 2007 - cell.com
Transcription and splicing are functionally coupled, resulting in highly efficient splicing of
RNA polymerase II (RNAP II) transcripts. The mechanism involved in this coupling is not …
RNA polymerase II (RNAP II) transcripts. The mechanism involved in this coupling is not …