Plant pan-genomes are the new reference
Recent years have seen a surge in plant genome sequencing projects and the comparison
of multiple related individuals. The high degree of genomic variation observed led to the …
of multiple related individuals. The high degree of genomic variation observed led to the …
Patterns and processes of diploidization in land plants
Most land plants are now known to be ancient polyploids that have rediploidized.
Diploidization involves many changes in genome organization that ultimately restore …
Diploidization involves many changes in genome organization that ultimately restore …
[HTML][HTML] Origin and evolution of the octoploid strawberry genome
Cultivated strawberry emerged from the hybridization of two wild octoploid species, both
descendants from the merger of four diploid progenitor species into a single nucleus more …
descendants from the merger of four diploid progenitor species into a single nucleus more …
[HTML][HTML] Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass
Long-term climate change and periodic environmental extremes threaten food and fuel
security and global crop productivity,–. Although molecular and adaptive breeding strategies …
security and global crop productivity,–. Although molecular and adaptive breeding strategies …
[HTML][HTML] The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivars
Coffea arabica, an allotetraploid hybrid of Coffea eugenioides and Coffea canephora, is the
source of approximately 60% of coffee products worldwide, and its cultivated accessions …
source of approximately 60% of coffee products worldwide, and its cultivated accessions …
Polyploidy, the nucleotype, and novelty: the impact of genome doubling on the biology of the cell
Polyploidy is a key mechanism of genome evolution and speciation, particularly in plants.
Many aspects of polyploidy have been elucidated with the tools that have become available …
Many aspects of polyploidy have been elucidated with the tools that have become available …
[HTML][HTML] Impacts of allopolyploidization and structural variation on intraspecific diversification in Brassica rapa
Background Despite the prevalence and recurrence of polyploidization in the speciation of
flowering plants, its impacts on crop intraspecific genome diversification are largely …
flowering plants, its impacts on crop intraspecific genome diversification are largely …
[PDF][PDF] Haplotype-phased genome and evolution of phytonutrient pathways of tetraploid blueberry
Abstract Background Highbush blueberry (Vaccinium corymbosum) has long been
consumed for its unique flavor and composition of health-promoting phytonutrients …
consumed for its unique flavor and composition of health-promoting phytonutrients …
[HTML][HTML] Genomics of evolutionary novelty in hybrids and polyploids
G Nieto Feliner, J Casacuberta, JF Wendel - Frontiers in genetics, 2020 - frontiersin.org
It has long been recognized that hybridization and polyploidy are prominent processes in
plant evolution. Although classically recognized as significant in speciation and adaptation …
plant evolution. Although classically recognized as significant in speciation and adaptation …
[HTML][HTML] Double-edged sword: the evolutionary consequences of the epigenetic silencing of transposable elements
Transposable elements (TEs) are genomic parasites that selfishly replicate at the expense of
host fitness. Fifty years of evolutionary studies of TEs have concentrated on the deleterious …
host fitness. Fifty years of evolutionary studies of TEs have concentrated on the deleterious …