[HTML][HTML] MDSC: Markers, development, states, and unaddressed complexity
Myeloid-derived suppressor cells (MDSCs) are one of the most discussed biological entities
in immunology. While the context and classification of this group of cells has evolved …
in immunology. While the context and classification of this group of cells has evolved …
Integrating genetic and non-genetic determinants of cancer evolution by single-cell multi-omics
AS Nam, R Chaligne, DA Landau - Nature Reviews Genetics, 2021 - nature.com
Cancer represents an evolutionary process through which growing malignant populations
genetically diversify, leading to tumour progression, relapse and resistance to therapy. In …
genetically diversify, leading to tumour progression, relapse and resistance to therapy. In …
Single-cell chromatin state analysis with Signac
The recent development of experimental methods for measuring chromatin state at single-
cell resolution has created a need for computational tools capable of analyzing these …
cell resolution has created a need for computational tools capable of analyzing these …
Lineage tracing meets single-cell omics: opportunities and challenges
A fundamental goal of developmental and stem cell biology is to map the developmental
history (ontogeny) of differentiated cell types. Recent advances in high-throughput single …
history (ontogeny) of differentiated cell types. Recent advances in high-throughput single …
Single-cell multi-omics of mitochondrial DNA disorders reveals dynamics of purifying selection across human immune cells
CA Lareau, SM Dubois, FA Buquicchio, YH Hsieh… - Nature …, 2023 - nature.com
Pathogenic mutations in mitochondrial DNA (mtDNA) compromise cellular metabolism,
contributing to cellular heterogeneity and disease. Diverse mutations are associated with …
contributing to cellular heterogeneity and disease. Diverse mutations are associated with …
Applying high-dimensional single-cell technologies to the analysis of cancer immunotherapy
SH Gohil, JB Iorgulescu, DA Braun, DB Keskin… - Nature Reviews …, 2021 - nature.com
Advances in molecular biology, microfluidics and bioinformatics have empowered the study
of thousands or even millions of individual cells from malignant tumours at the single-cell …
of thousands or even millions of individual cells from malignant tumours at the single-cell …
Massively parallel single-cell mitochondrial DNA genotyping and chromatin profiling
Natural mitochondrial DNA (mtDNA) mutations enable the inference of clonal relationships
among cells. mtDNA can be profiled along with measures of cell state, but has not yet been …
among cells. mtDNA can be profiled along with measures of cell state, but has not yet been …
[HTML][HTML] Deciphering cell states and genealogies of human haematopoiesis
The human blood system is maintained through the differentiation and massive amplification
of a limited number of long-lived haematopoietic stem cells (HSCs). Perturbations to this …
of a limited number of long-lived haematopoietic stem cells (HSCs). Perturbations to this …
Mitochondrial genetics through the lens of single-cell multi-omics
Mitochondria carry their own genetic information encoding for a subset of protein-coding
genes and translational machinery essential for cellular respiration and metabolism. Despite …
genes and translational machinery essential for cellular respiration and metabolism. Despite …
Single-cell RNA sequencing in cardiovascular development, disease and medicine
Advances in single-cell RNA sequencing (scRNA-seq) technologies in the past 10 years
have had a transformative effect on biomedical research, enabling the profiling and analysis …
have had a transformative effect on biomedical research, enabling the profiling and analysis …