Generative models for network neuroscience: prospects and promise

RF Betzel, DS Bassett - Journal of The Royal Society …, 2017 - royalsocietypublishing.org
Network neuroscience is the emerging discipline concerned with investigating the complex
patterns of interconnections found in neural systems, and identifying principles with which to …

How do efficient coding strategies depend on origins of noise in neural circuits?

BAW Brinkman, AI Weber, F Rieke… - PLoS computational …, 2016 - journals.plos.org
Neural circuits reliably encode and transmit signals despite the presence of noise at multiple
stages of processing. The efficient coding hypothesis, a guiding principle in computational …

Inferring synaptic inputs from spikes with a conductance-based neural encoding model

KW Latimer, F Rieke, JW Pillow - Elife, 2019 - elifesciences.org
Descriptive statistical models of neural responses generally aim to characterize the mapping
from stimuli to spike responses while ignoring biophysical details of the encoding process …

Autonomous emergence of connectivity assemblies via spike triplet interactions

L Montangie, C Miehl, J Gjorgjieva - PLOS Computational Biology, 2020 - journals.plos.org
Non-random connectivity can emerge without structured external input driven by activity-
dependent mechanisms of synaptic plasticity based on precise spiking patterns. Here we …

Triplet correlations among similarly tuned cells impact population coding

NA Cayco-Gajic, J Zylberberg… - Frontiers in …, 2015 - frontiersin.org
Which statistical features of spiking activity matter for how stimuli are encoded in neural
populations? A vast body of work has explored how firing rates in individual cells and …

Signatures of criticality arise from random subsampling in simple population models

M Nonnenmacher, C Behrens, P Berens… - PLoS computational …, 2017 - journals.plos.org
The rise of large-scale recordings of neuronal activity has fueled the hope to gain new
insights into the collective activity of neural ensembles. How can one link the statistics of …

The quality and complexity of pairwise maximum entropy models for large cortical populations

VK Olsen, JR Whitlock, Y Roudi - PLOS Computational Biology, 2024 - journals.plos.org
We investigate the ability of the pairwise maximum entropy (PME) model to describe the
spiking activity of large populations of neurons recorded from the visual, auditory, motor, and …

Uncovering hidden network architecture from spiking activities using an exact statistical input-output relation of neurons

SR Shomali, SN Rasuli, MN Ahmadabadi… - Communications …, 2023 - nature.com
Identifying network architecture from observed neural activities is crucial in neuroscience
studies. A key requirement is knowledge of the statistical input-output relation of single …

Weak higher-order interactions in macroscopic functional networks of the resting brain

X Huang, K Xu, C Chu, T Jiang, S Yu - Journal of Neuroscience, 2017 - Soc Neuroscience
Interactions among different brain regions are usually examined through functional
connectivity (FC) analysis, which is exclusively based on measuring pairwise correlations in …

Input nonlinearities can shape beyond-pairwise correlations and improve information transmission by neural populations

J Zylberberg, E Shea-Brown - Physical Review E, 2015 - APS
While recent recordings from neural populations show beyond-pairwise, or higher-order,
correlations (HOC), we have little understanding of how HOC arise from network interactions …