Advancements in zebrafish applications for 21st century toxicology
GR Garcia, PD Noyes, RL Tanguay - Pharmacology & therapeutics, 2016 - Elsevier
The zebrafish model is the only available high-throughput vertebrate assessment system,
and it is uniquely suited for studies of in vivo cell biology. A sequenced and annotated …
and it is uniquely suited for studies of in vivo cell biology. A sequenced and annotated …
Tol2: a versatile gene transfer vector in vertebrates
K Kawakami - Genome biology, 2007 - Springer
The medaka fish Tol2 element is an autonomous transposon that encodes a fully functional
transposase. The transposase protein can catalyze transposition of a transposon construct …
transposase. The transposase protein can catalyze transposition of a transposon construct …
The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons
To connect human biology to fish biomedical models, we sequenced the genome of spotted
gar (Lepisosteus oculatus), whose lineage diverged from teleosts before teleost genome …
gar (Lepisosteus oculatus), whose lineage diverged from teleosts before teleost genome …
A robotic multidimensional directed evolution approach applied to fluorescent voltage reporters
We developed a new way to engineer complex proteins toward multidimensional
specifications using a simple, yet scalable, directed evolution strategy. By robotically picking …
specifications using a simple, yet scalable, directed evolution strategy. By robotically picking …
A unique chromatin signature uncovers early developmental enhancers in humans
A Rada-Iglesias, R Bajpai, T Swigut, SA Brugmann… - Nature, 2011 - nature.com
Cell-fate transitions involve the integration of genomic information encoded by regulatory
elements, such as enhancers, with the cellular environment,. However, identification of …
elements, such as enhancers, with the cellular environment,. However, identification of …
Genome sequencing of autism-affected families reveals disruption of putative noncoding regulatory DNA
TN Turner, F Hormozdiari, MH Duyzend… - The American Journal of …, 2016 - cell.com
We performed whole-genome sequencing (WGS) of 208 genomes from 53 families affected
by simplex autism. For the majority of these families, no copy-number variant (CNV) or …
by simplex autism. For the majority of these families, no copy-number variant (CNV) or …
The Tol2kit: A multisite gateway‐based construction kit for Tol2 transposon transgenesis constructs
KM Kwan, E Fujimoto, C Grabher… - … dynamics: an official …, 2007 - Wiley Online Library
Transgenesis is an important tool for assessing gene function. In zebrafish, transgenesis has
suffered from three problems: the labor of building complex expression constructs using …
suffered from three problems: the labor of building complex expression constructs using …
Labeling of active neural circuits in vivo with designed calcium integrators
The identification of active neurons and circuits in vivo is a fundamental challenge in
understanding the neural basis of behavior. Genetically encoded calcium (Ca2+) indicators …
understanding the neural basis of behavior. Genetically encoded calcium (Ca2+) indicators …
Mapping brain activity at scale with cluster computing
Understanding brain function requires monitoring and interpreting the activity of large
networks of neurons during behavior. Advances in recording technology are greatly …
networks of neurons during behavior. Advances in recording technology are greatly …
[HTML][HTML] Bone regenerates via dedifferentiation of osteoblasts in the zebrafish fin
While mammals have a limited capacity to repair bone defects, zebrafish can completely
regenerate amputated bony structures of their fins. Fin regeneration is dependent on …
regenerate amputated bony structures of their fins. Fin regeneration is dependent on …