Scaling up: A guide to high‐throughput genomic approaches for biodiversity analysis
TM Porter, M Hajibabaei - Molecular ecology, 2018 - Wiley Online Library
The purpose of this review is to present the most common and emerging DNA‐based
methods used to generate data for biodiversity and biomonitoring studies. As environmental …
methods used to generate data for biodiversity and biomonitoring studies. As environmental …
Revisiting the 'Gadgil effect': do interguild fungal interactions control carbon cycling in forest soils?
CW Fernandez, PG Kennedy - New phytologist, 2016 - Wiley Online Library
In forest ecosystems, ectomycorrhizal and saprotrophic fungi play a central role in the
breakdown of soil organic matter (SOM). Competition between these two fungal guilds has …
breakdown of soil organic matter (SOM). Competition between these two fungal guilds has …
[图书][B] Environmental DNA: For biodiversity research and monitoring
Environmental DNA (eDNA) refers to DNA that can be extracted from environmental
samples (such as soil, water, feces, or air) without the prior isolation of any target organism …
samples (such as soil, water, feces, or air) without the prior isolation of any target organism …
Improved software detection and extraction of ITS1 and ITS 2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing …
J Bengtsson‐Palme, M Ryberg… - Methods in ecology …, 2013 - Wiley Online Library
The nuclear ribosomal internal transcribed spacer (ITS) region is the primary choice for
molecular identification of fungi. Its two highly variable spacers (ITS 1 and ITS 2) are usually …
molecular identification of fungi. Its two highly variable spacers (ITS 1 and ITS 2) are usually …
New primers to amplify the fungal ITS2 region–evaluation by 454-sequencing of artificial and natural communities
K Ihrmark, ITM Bödeker, K Cruz-Martinez… - FEMS microbiology …, 2012 - academic.oup.com
With recent methodological advances, molecular markers are increasingly used for semi-
quantitative analyses of fungal communities. The aim to preserve quantitative relationships …
quantitative analyses of fungal communities. The aim to preserve quantitative relationships …
Forgotten fungi—the gut mycobiome in human health and disease
The human body is home to a complex and diverse microbial ecosystem that plays a central
role in host health. This includes a diversity of fungal species that is collectively referred to …
role in host health. This includes a diversity of fungal species that is collectively referred to …
[HTML][HTML] Inter-plant communication through mycorrhizal networks mediates complex adaptive behaviour in plant communities
Adaptive behaviour of plants, including rapid changes in physiology, gene regulation and
defence response, can be altered when linked to neighbouring plants by a mycorrhizal …
defence response, can be altered when linked to neighbouring plants by a mycorrhizal …
Mycorrhizal networks: mechanisms, ecology and modelling
SW Simard, KJ Beiler, MA Bingham, JR Deslippe… - Fungal Biology …, 2012 - Elsevier
Mycorrhizal networks, defined as a common mycorrhizal mycelium linking the roots of at
least two plants, occur in all major terrestrial ecosystems. This review discusses the recent …
least two plants, occur in all major terrestrial ecosystems. This review discusses the recent …
Ectomycorrhizal lifestyle in fungi: global diversity, distribution, and evolution of phylogenetic lineages
The ectomycorrhizal (EcM) symbiosis involves a large number of plant and fungal taxa
worldwide. During studies on EcM diversity, numerous misidentifications, and contradictory …
worldwide. During studies on EcM diversity, numerous misidentifications, and contradictory …
454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity
Soil fungi play a major role in ecological and biogeochemical processes in forests. Little is
known, however, about the structure and richness of different fungal communities and the …
known, however, about the structure and richness of different fungal communities and the …