A chromosome-level genome assembly for the Silkie chicken resolves complete sequences for key chicken metabolic, reproductive, and immunity genes
F Zhu, ZT Yin, QS Zhao, YX Sun, YC Jie… - Communications …, 2023 - nature.com
A set of high-quality pan-genomes would help identify important genes that are still
hidden/incomplete in bird reference genomes. In an attempt to address these issues, we …
hidden/incomplete in bird reference genomes. In an attempt to address these issues, we …
The flight of chicken genomics and allied omics-a mini review
Humans mostly obtain animal-based proteins through chicken meat and eggs since there
are no societal taboos. The modern chicken is most effective for producing affordable and …
are no societal taboos. The modern chicken is most effective for producing affordable and …
High quality assemblies of four indigenous chicken genomes and related functional data resources
S Wu, K Wang, T Dou, S Yuan, S Yan, Z Xu, Y Liu… - Scientific Data, 2024 - nature.com
Many lines of evidence indicate that red jungle fowl (RJF) is the primary ancestor of
domestic chickens. Although multiple versions of RJF (galgal2-galgal5 and GRCg6a) and …
domestic chickens. Although multiple versions of RJF (galgal2-galgal5 and GRCg6a) and …
A pangenome graph reference of 30 chicken genomes allows genotyping of large and complex structural variants
Background The red junglefowl, the wild outgroup of domestic chickens, has historically
served as a reference for genomic studies of domestic chickens. These studies have …
served as a reference for genomic studies of domestic chickens. These studies have …
Feed the Future Innovation Lab for Genomics to Improve Poultry: a holistic approach to improve indigenous chicken production focusing on resilience to Newcastle …
Small-scale poultry production in Africa plays a significant role in alleviating malnutrition and
poverty in rural communities. Global climate change and infectious poultry disease such as …
poverty in rural communities. Global climate change and infectious poultry disease such as …
[HTML][HTML] Annotations of four high-quality indigenous chicken genomes identify more than one thousand missing genes in subtelomeric regions and micro …
S Wu, T Dou, S Yuan, S Yan, Z Xu, Y Liu, Z Jian, J Zhao… - BMC genomics, 2024 - Springer
Background Although multiple chicken genomes have been assembled and annotated, the
numbers of protein-coding genes in chicken genomes and their variation among breeds are …
numbers of protein-coding genes in chicken genomes and their variation among breeds are …
Assessing the feasibility, safety, and nutritional quality of using wild-caught pest flies in animal feed
K Van Nest, SE Swistek, ML Olmstead… - Journal of Economic …, 2024 - academic.oup.com
Studies have investigated the potential of using farmed insects in animal feeds; however,
little research has been done using wild-caught insects for this purpose. Concerns about …
little research has been done using wild-caught insects for this purpose. Concerns about …
Enriched atlas of lncRNA and protein-coding genes for the GRCg7b chicken assembly and its functional annotation across 47 tissues
Gene atlases for livestock are steadily improving thanks to new genome assemblies and
new expression data improving the gene annotation. However, gene content varies across …
new expression data improving the gene annotation. However, gene content varies across …
A first complete catalog of highly expressed genes in eight chicken tissues reveals uncharacterized gene families specific for the chicken testis
B Piégu, G Lefort, C Douet, M Milhes… - Physiological …, 2024 - journals.physiology.org
Based on next-generation sequencing, we established a repertoire of differentially
overexpressed genes (DoEGs) in eight adult chicken tissues: the testis, brain, lung, liver …
overexpressed genes (DoEGs) in eight adult chicken tissues: the testis, brain, lung, liver …
GEGA (Gallus Enriched Gene Annotation): an online tool providing genomics and functional information across 47 tissues for a chicken gene-enriched atlas gathering …
F Degalez, P Bardou… - NAR Genomics and …, 2024 - academic.oup.com
GEGA is a user-friendly tool designed to navigate through various genomic and functional
information related to an enriched gene atlas in chicken that integrates the gene catalogues …
information related to an enriched gene atlas in chicken that integrates the gene catalogues …