A practical guide to protein dynamics from 15N spin relaxation in solution
S Morin - Progress in nuclear magnetic resonance spectroscopy, 2011 - Elsevier
It is now well accepted that structures alone cannot explain protein function and biochemical
data. Indeed, dynamics on different timescales play an important role in their function. Many …
data. Indeed, dynamics on different timescales play an important role in their function. Many …
Evolution of drug resistance: insight on TEM β-lactamases structure and activity and β-lactam antibiotics
AC Pimenta, R Fernandes… - Mini reviews in medicinal …, 2014 - ingentaconnect.com
Since the discovery of the first penicillin bacterial resistance to β-lactam antibiotics has
spread and evolved promoting new resistances to pathogens. The most common …
spread and evolved promoting new resistances to pathogens. The most common …
A triple mutant in the Ω-loop of TEM-1 β-lactamase changes the substrate profile via a large conformational change and an altered general base for catalysis
V Stojanoski, DC Chow, L Hu, B Sankaran… - Journal of Biological …, 2015 - ASBMB
β-Lactamases are bacterial enzymes that hydrolyze β-lactam antibiotics. TEM-1 is a
prevalent plasmid-encoded β-lactamase in Gram-negative bacteria that efficiently catalyzes …
prevalent plasmid-encoded β-lactamase in Gram-negative bacteria that efficiently catalyzes …
relaxGUI: a new software for fast and simple NMR relaxation data analysis and calculation of ps-ns and μs motion of proteins
M Bieri, EJ d'Auvergne, PR Gooley - Journal of biomolecular NMR, 2011 - Springer
Investigation of protein dynamics on the ps-ns and μs-ms timeframes provides detailed
insight into the mechanisms of enzymes and the binding properties of proteins. Nuclear …
insight into the mechanisms of enzymes and the binding properties of proteins. Nuclear …
Conformational dynamics of the helix 10 region as an allosteric site in class A β-lactamase inhibitory binding
β-Lactamase inhibitory protein (BLIP) can effectively inactivate class A β-lactamases, but
with very different degrees of potency. Understanding the different roles of BLIP in class A β …
with very different degrees of potency. Understanding the different roles of BLIP in class A β …
Defining the architecture of KPC-2 Carbapenemase: identifying allosteric networks to fight antibiotics resistance
The rise of multi-drug resistance in bacterial pathogens is one of the grand challenges
facing medical science. A major concern is the speed of development of β-lactamase …
facing medical science. A major concern is the speed of development of β-lactamase …
Applications of NMR and computational methodologies to study protein dynamics
Overwhelming evidence now illustrates the defining role of atomic-scale protein flexibility in
biological events such as allostery, cell signaling, and enzyme catalysis. Over the years …
biological events such as allostery, cell signaling, and enzyme catalysis. Over the years …
Synergistic applications of MD and NMR for the study of biological systems
Modern biological sciences are becoming more and more multidisciplinary. At the same
time, theoretical and computational approaches gain in reliability and their field of …
time, theoretical and computational approaches gain in reliability and their field of …
Maintenance of native-like protein dynamics may not be required for engineering functional proteins
Proteins are dynamic systems, and understanding dynamics is critical for fully understanding
protein function. Therefore, the question of whether laboratory engineering has an impact on …
protein function. Therefore, the question of whether laboratory engineering has an impact on …
Machine learning classification model for functional binding modes of TEM-1 β-lactamase
TEM family of enzymes is one of the most commonly encountered β-lactamases groups with
different catalytic capabilities against various antibiotics. Despite the studies investigating …
different catalytic capabilities against various antibiotics. Despite the studies investigating …