Cell-free gene expression: an expanded repertoire of applications

AD Silverman, AS Karim, MC Jewett - Nature Reviews Genetics, 2020 - nature.com
Cell-free biology is the activation of biological processes without the use of intact living cells.
It has been used for more than 50 years across the life sciences as a foundational research …

Cell-free gene expression

D Garenne, MC Haines, EF Romantseva… - Nature reviews …, 2021 - nature.com
Cell-free gene expression (CFE) emerged as an alternative approach to living cells for
specific applications in protein synthesis and labelling for structural biology and proteomics …

Customizing cellular signal processing by synthetic multi-level regulatory circuits

Y Gao, L Wang, B Wang - Nature Communications, 2023 - nature.com
As synthetic biology permeates society, the signal processing circuits in engineered living
systems must be customized to meet practical demands. Towards this mission, novel …

The all-E. coliTXTL toolbox 3.0: new capabilities of a cell-free synthetic biology platform

D Garenne, S Thompson, A Brisson… - Synthetic …, 2021 - academic.oup.com
The new generation of cell-free gene expression systems enables the prototyping and
engineering of biological systems in vitro over a remarkable scope of applications and …

Cell-free gene expression: methods and applications

AC Hunt, BJ Rasor, K Seki, HM Ekas, KF Warfel… - Chemical …, 2024 - ACS Publications
Cell-free gene expression (CFE) systems empower synthetic biologists to build biological
molecules and processes outside of living intact cells. The foundational principle is that …

Systematic quantification of sequence and structural determinants controlling mRNA stability in bacterial operons

DP Cetnar, HM Salis - ACS Synthetic Biology, 2021 - ACS Publications
mRNA degradation is a central process that affects all gene expression levels, and yet, the
determinants that control mRNA decay rates remain poorly characterized. Here, we applied …

Engineering activatable promoters for scalable and multi-input CRISPRa/i circuits

D Alba Burbano, RAL Cardiff… - Proceedings of the …, 2023 - National Acad Sciences
Dynamic, multi-input gene regulatory networks (GRNs) are ubiquitous in nature. Multilayer
CRISPR-based genetic circuits hold great promise for building GRNs akin to those found in …

The new age of cell-free biology

V Noireaux, AP Liu - Annual review of biomedical engineering, 2020 - annualreviews.org
The cell-free molecular synthesis of biochemical systems is a rapidly growing field of
research. Advances in the Human Genome Project, DNA synthesis, and other technologies …

A microfluidic optimal experimental design platform for forward design of cell-free genetic networks

B van Sluijs, RJM Maas, AJ van der Linden… - Nature …, 2022 - nature.com
Cell-free protein synthesis has been widely used as a “breadboard” for design of synthetic
genetic networks. However, due to a severe lack of modularity, forward engineering of …

In vitro implementation of robust gene regulation in a synthetic biomolecular integral controller

DK Agrawal, R Marshall, V Noireaux… - Nature …, 2019 - nature.com
Feedback mechanisms play a critical role in the maintenance of cell homeostasis in the
presence of disturbances and uncertainties. Motivated by the need to tune the dynamics and …