Thermodynamics of information

JMR Parrondo, JM Horowitz, T Sagawa - Nature physics, 2015 - nature.com
By its very nature, the second law of thermodynamics is probabilistic, in that its formulation
requires a probabilistic description of the state of a system. This raises questions about the …

Molecular ratchets and kinetic asymmetry: Giving chemistry direction

S Borsley, DA Leigh… - Angewandte Chemie …, 2024 - Wiley Online Library
Over the last two decades ratchet mechanisms have transformed the understanding and
design of stochastic molecular systems—biological, chemical and physical—in a move away …

[图书][B] Stochastic thermodynamics: an introduction

L Peliti, S Pigolotti - 2021 - books.google.com
The first comprehensive graduate-level introduction to stochastic thermodynamics
Stochastic thermodynamics is a well-defined subfield of statistical physics that aims to …

Thermodynamic uncertainty relation for biomolecular processes

AC Barato, U Seifert - Physical review letters, 2015 - APS
Biomolecular systems like molecular motors or pumps, transcription and translation
machinery, and other enzymatic reactions, can be described as Markov processes on a …

Nonequilibrium thermodynamics of chemical reaction networks: Wisdom from stochastic thermodynamics

R Rao, M Esposito - Physical Review X, 2016 - APS
We build a rigorous nonequilibrium thermodynamic description for open chemical reaction
networks of elementary reactions. Their dynamics is described by deterministic rate …

Efficiency of cellular information processing

AC Barato, D Hartich, U Seifert - New Journal of Physics, 2014 - iopscience.iop.org
We show that a rate of conditional Shannon entropy reduction, characterizing the learning of
an internal process about an external process, is bounded by the thermodynamic entropy …

Elucidating interplay of speed and accuracy in biological error correction

K Banerjee, AB Kolomeisky… - Proceedings of the …, 2017 - National Acad Sciences
One of the most fascinating features of biological systems is the ability to sustain high
accuracy of all major cellular processes despite the stochastic nature of underlying chemical …

Thermodynamics of computational copying in biochemical systems

TE Ouldridge, CC Govern, PR ten Wolde - Physical Review X, 2017 - APS
Living cells use readout molecules to record the state of receptor proteins, similar to
measurements or copies in typical computational devices. But is this analogy rigorous? Can …

The thermodynamic efficiency of computations made in cells across the range of life

CP Kempes, D Wolpert, Z Cohen… - … Transactions of the …, 2017 - royalsocietypublishing.org
Biological organisms must perform computation as they grow, reproduce and evolve.
Moreover, ever since Landauer's bound was proposed, it has been known that all …

Thermodynamics of error correction

P Sartori, S Pigolotti - Physical Review X, 2015 - APS
Information processing at the molecular scale is limited by thermal fluctuations. This can
cause undesired consequences in copying information since thermal noise can lead to …