Allostery is the mechanism by which information and control are propagated in
biomolecules. It regulates ligand binding, chemical reactions, and conformational changes …

Being a core tool, graph theory, as a mathematical formalism in mathematical chemistry, has
become an essential approach for studying the complex behavior and interactions in protein …

Although the αC-β4 loop is a stable feature of all protein kinases, the importance of this motif
as a conserved element of secondary structure, as well as its links to the hydrophobic …

Systems with many stable configurations abound in nature, both in living and inanimate
matter, encoding a rich variety of behaviors. In equilibrium, a multistable system is more …

Although the αC-β4 loop is a stable feature of all protein kinases, the importance of this motif
as a conserved element of secondary structure, as well as its links to the hydrophobic …

Decoding allostery at the atomic level is essential for understanding the relationship
between a protein's sequence, structure, and dynamics. Recently, we have shown that …

SRC kinase associated phosphoprotein 1 (SKAP1), an adaptor for protein assembly, plays
an important role in the immune system such as stabilizing immune synapses …

Dynamics-driven allostery provides important insights into the working mechanics of
proteins, especially enzymes. In this study, we employ this paradigm to answer a basic …

We propose a new way of utilizing normal modes to study protein conformational transitions.
Instead of considering individual modes independently, we show that a weighted mixture of …

Proteins carry out their biological activity as dynamic structures and populate in solution or in
biological membranes structural distributions with different degrees of heterogeneity. The …