Data analysis strategies for targeted and untargeted LC-MS metabolomic studies: Overview and workflow
Data analysis is a very challenging task in LC-MS metabolomic studies. The use of powerful
analytical techniques (eg, high-resolution mass spectrometry) provides high-dimensional …
analytical techniques (eg, high-resolution mass spectrometry) provides high-dimensional …
Limitations and pitfalls in protein identification by mass spectrometry
G Lubec, L Afjehi-Sadat - Chemical reviews, 2007 - ACS Publications
The advent of proteomics techniques for protein identification (PrI) represented a major step
forward in protein chemistry, 1, 2 and indeed, a legion of laboratories are now using different …
forward in protein chemistry, 1, 2 and indeed, a legion of laboratories are now using different …
A universal denoising and peak picking algorithm for LC− MS based on matched filtration in the chromatographic time domain
VP Andreev, T Rejtar, HS Chen, EV Moskovets… - Analytical …, 2003 - ACS Publications
A new denoising and peak picking algorithm (MEND, matched filtration with experimental
noise determination) for analysis of LC− MS data is described. The algorithm minimizes both …
noise determination) for analysis of LC− MS data is described. The algorithm minimizes both …
The concept of spectral accuracy for MS
Y Wang, M Gu - 2010 - ACS Publications
Though MS has always appeared to be quite different from spectroscopy to analytical
chemists who are familiar with both, a careful examination from historical and theoretical …
chemists who are familiar with both, a careful examination from historical and theoretical …
Development of a scoring parameter to characterize data quality of centroids in high-resolution mass spectra
M Reuschenbach, LL Hohrenk-Danzouma… - Analytical and …, 2022 - Springer
High-resolution mass spectrometry is widely used in many research fields allowing for
accurate mass determinations. In this context, it is pretty standard that high-resolution profile …
accurate mass determinations. In this context, it is pretty standard that high-resolution profile …
Internal calibrants allow high accuracy peptide matching between MALDI imaging MS and LC-MS/MS
JOR Gustafsson, JS Eddes, S Meding, T Koudelka… - Journal of …, 2012 - Elsevier
One of the important challenges for MALDI imaging mass spectrometry (MALDI-IMS) is the
unambiguous identification of measured analytes. One way to do this is to match tryptic …
unambiguous identification of measured analytes. One way to do this is to match tryptic …
Generation of CsI cluster ions for mass calibration in matrix-assisted laser desorption/ionization mass spectrometry
X Lou, JLJ Van Dongen, EW Meijer - Journal of the American Society for …, 2010 - Springer
A simple method was developed for the generation of cesium iodide (CsI) cluster ions up to
m/z over 20,000 in matrix-assisted laser desorption/ionization mass spectrometry (MALDI …
m/z over 20,000 in matrix-assisted laser desorption/ionization mass spectrometry (MALDI …
High-Speed, High-Resolution Monolithic Capillary LC− MALDI MS Using an Off-Line Continuous Deposition Interface for Proteomic Analysis
High-speed, high-resolution LC separations, using a poly (styrene− divinylbenzene)
monolithic column, have been coupled to MALDI MS and MS/MS through an off-line …
monolithic column, have been coupled to MALDI MS and MS/MS through an off-line …
Characterizing and alleviating ion suppression effects in atmospheric pressure matrix‐assisted laser desorption/ionization
Rationale As a powerful ambient ion source, atmospheric pressure (AP) matrix‐assisted
laser desorption/ionization (MALDI) enables direct analysis at atmospheric …
laser desorption/ionization (MALDI) enables direct analysis at atmospheric …
Increased identification of peptides by enhanced data processing of high-resolution MALDI TOF/TOF mass spectra prior to database searching
This paper presents application of sequential enhanced data processing procedures to high-
resolution tandem mass spectra for identification of peptides using the Mascot database …
resolution tandem mass spectra for identification of peptides using the Mascot database …