Enriching contextualized language model from knowledge graph for biomedical information extraction

H Fei, Y Ren, Y Zhang, D Ji, X Liang - Briefings in bioinformatics, 2021 - academic.oup.com
Biomedical information extraction (BioIE) is an important task. The aim is to analyze
biomedical texts and extract structured information such as named entities and semantic …

A review of biomedical datasets relating to drug discovery: a knowledge graph perspective

S Bonner, IP Barrett, C Ye, R Swiers… - Briefings in …, 2022 - academic.oup.com
Drug discovery and development is a complex and costly process. Machine learning
approaches are being investigated to help improve the effectiveness and speed of multiple …

An overview of graph databases and their applications in the biomedical domain

S Timón-Reina, M Rincón, R Martínez-Tomás - Database, 2021 - academic.oup.com
Over the past couple of decades, the explosion of densely interconnected data has
stimulated the research, development and adoption of graph database technologies. From …

Comparison of biomedical relationship extraction methods and models for knowledge graph creation

N Milošević, W Thielemann - Journal of Web Semantics, 2023 - Elsevier
Biomedical research is growing at such an exponential pace that scientists, researchers,
and practitioners are no more able to cope with the amount of published literature in the …

RTX-KG2: a system for building a semantically standardized knowledge graph for translational biomedicine

EC Wood, AK Glen, LG Kvarfordt, F Womack… - BMC …, 2022 - Springer
Background Biomedical translational science is increasingly using computational reasoning
on repositories of structured knowledge (such as UMLS, SemMedDB, ChEMBL, Reactome …

Knowledge-based biomedical data science

TJ Callahan, IJ Tripodi… - Annual review of …, 2020 - annualreviews.org
Knowledge-based biomedical data science involves the design and implementation of
computer systems that act as if they knew about biomedicine. Such systems depend on …

CROssBAR: comprehensive resource of biomedical relations with knowledge graph representations

T Doğan, H Atas, V Joshi, A Atakan… - Nucleic acids …, 2021 - academic.oup.com
Systemic analysis of available large-scale biological/biomedical data is critical for studying
biological mechanisms, and developing novel and effective treatment approaches against …

Odin ivr-interactive solution for emergency calls handling

BC Mocanu, ID Filip, RD Ungureanu, C Negru… - Applied Sciences, 2022 - mdpi.com
Human interaction in natural language with computer systems has been a prime focus of
research, and the field of conversational agents (including chatbots and Interactive Voice …

Development of a Knowledge Graph for Automatic Job Hazard Analysis: The Schema

S Pandithawatta, S Ahn, R Rameezdeen, CWK Chow… - Sensors, 2023 - mdpi.com
In the current practice, an essential element of safety management systems, Job Hazard
Analysis (JHA), is performed manually, relying on the safety personnel's experiential …

APDDD: Animal parasitic diseases and drugs database

Y Zhang, G Chen, S Zhou, L He, OO Ayanniyi… - … and Infectious Diseases, 2024 - Elsevier
Animal parasitic diseases not only have an economic impact, but also have serious social
and public health impacts. Although antiparasitic drugs can treat these diseases, it seems …