Mining cancer biology through bioinformatic analysis of proteomic data

M Manfredi, J Brandi, C Di Carlo… - Expert review of …, 2019 - Taylor & Francis
Introduction: Discovery proteomics for cancer research generates complex datasets of
diagnostic, prognostic, and therapeutic significance in human cancer. With the advent of …

Neutrophil extracellular trap formation correlates with favorable overall survival in high grade ovarian cancer

B Muqaku, D Pils, JC Mader, S Aust, A Mangold… - Cancers, 2020 - mdpi.com
It is still a question of debate whether neutrophils, often found in the tumor
microenvironment, mediate tumor-promoting or rather tumor-inhibiting activities. The present …

ROS induction targets persister cancer cells with low metabolic activity in NRAS-mutated melanoma

OM Eichhoff, CI Stoffel, J Käsler, L Briker, P Turko… - Cancer Research, 2023 - AACR
Clinical management of melanomas with NRAS mutations is challenging. Targeting MAPK
signaling is only beneficial to a small subset of patients due to resistance that arises through …

The human melanoma proteome atlas—Complementing the melanoma transcriptome

LH Betancourt, J Gil, A Sanchez… - Clinical and …, 2021 - Wiley Online Library
The MM500 meta‐study aims to establish a knowledge basis of the tumor proteome to serve
as a complement to genome and transcriptome studies. Somatic mutations and their effect …

Proteomic profiling of advanced melanoma patients to predict therapeutic response to anti-PD-1 therapy

N Zila, OM Eichhoff, I Steiner, T Mohr, A Bileck… - Clinical Cancer …, 2024 - AACR
Purpose: Despite high clinical need, there are no biomarkers that accurately predict the
response of patients with metastatic melanoma to anti-PD-1 therapy. Experimental Design …

A DNA replication-independent function of pre-replication complex genes during cell invasion in C. elegans

E Lattmann, T Deng, M Walser, P Widmer… - PLoS …, 2022 - journals.plos.org
Cell invasion is an initiating event during tumor cell metastasis and an essential process
during development. A screen of C. elegans orthologs of genes overexpressed in invasive …

Genomic and proteomic findings in early melanoma and opportunities for early diagnosis

R Teh, A Azimi, GM Pupo, M Ali… - Experimental …, 2023 - Wiley Online Library
Overdiagnosis of early melanoma is a significant problem. Due to subtle unique and
overlapping clinical and histological criteria between pigmented lesions and the risk of …

Octenidine-based hydrogel shows anti-inflammatory and protease-inhibitory capacities in wounded human skin

S Seiser, L Janker, N Zila, M Mildner, A Rakita… - Scientific Reports, 2021 - nature.com
Octenidine dihydrochloride (OCT) is a widely used antiseptic molecule, promoting skin
wound healing accompanied with improved scar quality after surgical procedures. However …

Proteomic profiling of cutaneous melanoma explains the aggressiveness of distant organ metastasis

A Azimi, E Patrick, R Teh, J Kim… - Experimental …, 2023 - Wiley Online Library
Despite recent developments in managing metastatic melanomas, patients' overall survival
remains low. Therefore, the current study aims to understand better the proteome‐wide …

Myofibroblast stroma differentiation in infiltrative basal cell carcinoma is accompanied by regulatory T‐cells

JM Ressler, N Zila, A Korosec, J Yu… - Journal of …, 2023 - Wiley Online Library
Introduction The implications of infiltrative compared to non‐infiltrative growth of cutaneous
basal cell carcinoma (BCC) on the tumor stroma and immune cell landscape are unknown …