Applications of hydrogen/deuterium exchange MS from 2012 to 2014

GF Pirrone, RE Iacob, JR Engen - Analytical chemistry, 2015 - ACS Publications
Hydrogen/deuterium exchange (HDX) detected by mass spectrometry (MS) is extraordinarily
useful in the study of many aspects of proteins, especially the analysis of protein …

DNA sliding clamps as therapeutic targets

AS Altieri, Z Kelman - Frontiers in molecular biosciences, 2018 - frontiersin.org
Chromosomal DNA replication is achieved by an assembly of multi-protein complexes at the
replication fork. DNA sliding clamps play an important role in this assembly and are …

Mapping protein–ligand interactions with proteolytic fragmentation, hydrogen/deuterium exchange-mass spectrometry

ES Gallagher, JW Hudgens - Methods in enzymology, 2016 - Elsevier
Biological processes are the result of noncovalent, protein–ligand interactions, where the
ligands range from small organic and inorganic molecules to lipids, nucleic acids, peptides …

Archaeal DNA replication

LM Kelman, Z Kelman - Annual review of genetics, 2014 - annualreviews.org
DNA replication is essential for all life forms. Although the process is fundamentally
conserved in the three domains of life, bioinformatic, biochemical, structural, and genetic …

Genome Replication in Thermococcus kodakarensis Independent of Cdc6 and an Origin of Replication

AM Gehring, DP Astling, R Matsumi… - Frontiers in …, 2017 - frontiersin.org
The initiation of DNA replication is typically tightly regulated by proteins that form initiation
complexes at specific sequences known as replication origins. In Archaea and Eukaryotes …

Archaeal DNA replication and repair: new genetic, biophysical and molecular tools for discovering and characterizing enzymes, pathways and mechanisms

KM Zatopek, AF Gardner… - FEMS microbiology …, 2018 - academic.oup.com
DNA replication and repair are essential biological processes needed for the survival of all
organisms. Although these processes are fundamentally conserved in the three domains …

Proliferating cell nuclear antigen in neutrophil fate

V Witko‐Sarsat, D Ohayon - Immunological Reviews, 2016 - Wiley Online Library
The life span of a neutrophil is a tightly regulated process as extended survival is beneficial
for pathogen elimination and cell death necessary to prevent cytotoxic content release from …

The GAN exonuclease or the flap endonuclease Fen1 and RNase HII are necessary for viability of Thermococcus kodakarensis

BW Burkhart, L Cubonova, MR Heider… - Journal of …, 2017 - Am Soc Microbiol
Many aspects of and factors required for DNA replication are conserved across all three
domains of life, but there are some significant differences surrounding lagging-strand …

Heat‐Shock protein A12A is a novel PCNA‐binding protein and promotes hepatocellular carcinoma growth

H Cheng, X Cao, X Min, X Zhang, Q Kong… - The FEBS …, 2020 - Wiley Online Library
Hepatocellular carcinoma (HCC) is a leading cause of cancer‐related death. Proliferating
cell nuclear antigen (PCNA) plays a pivotal role in cancer development and progression …

Destabilization of the PCNA trimer mediated by its interaction with the NEIL1 DNA glycosylase

A Prakash, K Moharana, SS Wallace… - Nucleic acids …, 2017 - academic.oup.com
The base excision repair (BER) pathway repairs oxidized lesions in the DNA that result from
reactive oxygen species generated in cells. If left unrepaired, these damaged DNA bases …