Embracing the unknown: disentangling the complexities of the soil microbiome

N Fierer - Nature Reviews Microbiology, 2017 - nature.com
Soil microorganisms are clearly a key component of both natural and managed ecosystems.
Despite the challenges of surviving in soil, a gram of soil can contain thousands of individual …

[HTML][HTML] Tax4Fun2: prediction of habitat-specific functional profiles and functional redundancy based on 16S rRNA gene sequences

F Wemheuer, JA Taylor, R Daniel, E Johnston… - Environmental …, 2020 - Springer
Abstract Background Sequencing of 16S rRNA genes has become a powerful technique to
study microbial communities and their responses towards changing environmental …

[HTML][HTML] Mineral vs. organic amendments: microbial community structure, activity and abundance of agriculturally relevant microbes are driven by long-term fertilization …

D Francioli, E Schulz, G Lentendu, T Wubet… - Frontiers in …, 2016 - frontiersin.org
Soil management is fundamental to all agricultural systems and fertilization practices have
contributed substantially to the impressive increases in food production. Despite the pivotal …

[HTML][HTML] Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests

K Kaiser, B Wemheuer, V Korolkow, F Wemheuer… - Scientific Reports, 2016 - nature.com
Soil bacteria provide a large range of ecosystem services such as nutrient cycling. Despite
their important role in soil systems, compositional and functional responses of bacterial …

[HTML][HTML] Composted cattle manure increases microbial activity and soil fertility more than composted swine manure in a submerged rice paddy

S Das, ST Jeong, S Das, PJ Kim - Frontiers in microbiology, 2017 - frontiersin.org
Livestock waste composts with minimum inorganic fertilizer as a soil amendment in low-
input intensive farming are a feasible agricultural practice to improve soil fertility and …

[HTML][HTML] Effects of continuous nitrogen fertilizer application on the diversity and composition of rhizosphere soil bacteria

N Ren, Y Wang, Y Ye, Y Zhao, Y Huang, W Fu… - Frontiers in …, 2020 - frontiersin.org
Little has been reported on the effects of long-term fertilization on rhizosphere soil microbial
diversity. Here, we investigated the effects of long-term continuous nitrogen (N) fertilization …

Effects of different vegetation restoration on soil nutrients, enzyme activities, and microbial communities in degraded karst landscapes in southwest China

ZX Lu, P Wang, HB Ou, SX Wei, LC Wu, Y Jiang… - Forest Ecology and …, 2022 - Elsevier
The karst area in southwestern China is one of the largest and continuous karst landforms in
the world, and its ecosystem is highly sensitive and fragile. Appropriate vegetation …

[PDF][PDF] Functional distribution of bacterial community under different land use patterns based on FaProTax function prediction.

S Liang, J Deng, Y Jiang, S Wu, Y Zhou… - Polish Journal of …, 2020 - researchgate.net
Functional Distribution of Bacterial Community under Different Land Use Patterns Based on
FaProTax Function Prediction Page 1 Author Copy • Author Copy • Author Copy • Author Copy • …

[HTML][HTML] Tree species shape soil bacterial community structure and function in temperate deciduous forests

A Dukunde, D Schneider, M Schmidt… - Frontiers in …, 2019 - frontiersin.org
Amplicon-based analysis of 16S rRNA genes and transcripts was used to assess the effect
of tree species composition on soil bacterial community structure and function in a temperate …

Land-use change affects the diversity and functionality of soil bacterial communities in semi-arid Chaco region, Argentina

E Viruel, CA Fontana, E Puglisi, JA Nasca… - Applied Soil …, 2022 - Elsevier
The semi-arid Chaco ecoregion has been heavily affected by the conversion of pastures to
cropland. Our knowledge about the impact of land use change on soil microbial community …