Bioinformatics analysis of whole exome sequencing data
This chapter contains a step-by-step protocol for identifying somatic SNPs and small Indels
from next-generation sequencing data of tumor samples and matching normal samples. The …
from next-generation sequencing data of tumor samples and matching normal samples. The …
Gapim: Discovering genetic variations on a real processing-in-memory system
Variant calling is a fundamental stage in genome analysis that identifies mutations
(variations) in a sequenced genome relative to a known reference genome. Pair-HMM is a …
(variations) in a sequenced genome relative to a known reference genome. Pair-HMM is a …
Rare And Undiagnosed Liver Diseases: New Insights From Genomic And Single Cell Transcriptomic Analyses
C Konkwo - 2024 - elischolar.library.yale.edu
Chronic liver disease (CLD) is a major global health problem, leading to an estimatedtwo
million annual deaths worldwide. Advances in next generation sequencing (NGS) …
million annual deaths worldwide. Advances in next generation sequencing (NGS) …
Pair-HMM accelerator based on non-cooperative structure
P Wang, Y Lei, Y Dou - IEICE Electronics Express, 2019 - jstage.jst.go.jp
Abstract Pair Hidden Markov Model (Pair-HMM) forward algorithm is gaining increasing
popularity in biological research tools. We propose a novel non-cooperative structure of Pair …
popularity in biological research tools. We propose a novel non-cooperative structure of Pair …