Synthetic biology for the directed evolution of protein biocatalysts: navigating sequence space intelligently
The amino acid sequence of a protein affects both its structure and its function. Thus, the
ability to modify the sequence, and hence the structure and activity, of individual proteins in …
ability to modify the sequence, and hence the structure and activity, of individual proteins in …
Beyond directed evolution—semi-rational protein engineering and design
S Lutz - Current opinion in biotechnology, 2010 - Elsevier
Over the past two decades, directed evolution has transformed the field of protein
engineering. The advances in understanding protein structure and function, in no …
engineering. The advances in understanding protein structure and function, in no …
Thermostable enzymes as biocatalysts in the biofuel industry
Lignocellulose is the most abundant carbohydrate source in nature and represents an ideal
renewable energy source. Thermostable enzymes that hydrolyze lignocellulose to its …
renewable energy source. Thermostable enzymes that hydrolyze lignocellulose to its …
Learning the pattern of epistasis linking genotype and phenotype in a protein
FJ Poelwijk, M Socolich, R Ranganathan - Nature communications, 2019 - nature.com
Understanding the pattern of epistasis—the non-independence of mutations—is critical for
relating genotype and phenotype. However, the combinatorial complexity of potential …
relating genotype and phenotype. However, the combinatorial complexity of potential …
SEEDbodies: fusion proteins based on strand-exchange engineered domain (SEED) CH3 heterodimers in an Fc analogue platform for asymmetric binders or …
JH Davis, C Aperlo, Y Li, E Kurosawa… - … , Design & Selection, 2010 - academic.oup.com
Bispecific antibodies and asymmetric Fc fusion proteins offer opportunities for important
advances in therapeutics. Bivalent IgG depends upon in vivo dimerization of its heavy …
advances in therapeutics. Bivalent IgG depends upon in vivo dimerization of its heavy …
Status of protein engineering for biocatalysts: how to design an industrially useful biocatalyst
Recent advances in the development of both experimental and computational protein
engineering tools have enabled a number of further successes in the development of …
engineering tools have enabled a number of further successes in the development of …
A family of thermostable fungal cellulases created by structure-guided recombination
P Heinzelman, CD Snow, I Wu… - Proceedings of the …, 2009 - National Acad Sciences
SCHEMA structure-guided recombination of 3 fungal class II cellobiohydrolases (CBH II
cellulases) has yielded a collection of highly thermostable CBH II chimeras. Twenty-three of …
cellulases) has yielded a collection of highly thermostable CBH II chimeras. Twenty-three of …
[HTML][HTML] Recent advances in rational approaches for enzyme engineering
K Steiner, H Schwab - Computational and structural biotechnology journal, 2012 - Elsevier
Enzymes are an attractive alternative in the asymmetric syntheses of chiral building blocks.
To meet the requirements of industrial biotechnology and to introduce new functionalities …
To meet the requirements of industrial biotechnology and to introduce new functionalities …
Advances in laboratory evolution of enzymes
S Bershtein, DS Tawfik - Current opinion in chemical biology, 2008 - Elsevier
We address recent developments in the area of laboratory, or directed evolution, with a
focus on enzymes and on new methodologies of generic potential. We survey three main …
focus on enzymes and on new methodologies of generic potential. We survey three main …
In vivo selection of a computationally designed SCHEMA AAV library yields a novel variant for infection of adult neural stem cells in the SVZ
DS Ojala, S Sun, JL Santiago-Ortiz, MG Shapiro… - Molecular Therapy, 2018 - cell.com
Directed evolution continues to expand the capabilities of complex biomolecules for a range
of applications, such as adeno-associated virus vectors for gene therapy; however …
of applications, such as adeno-associated virus vectors for gene therapy; however …