On the calculation of diffusion coefficients in confined fluids and interfaces with an application to the liquid− vapor interface of water

P Liu, E Harder, BJ Berne - The Journal of Physical Chemistry B, 2004 - ACS Publications
We propose a general methodology for calculating the self-diffusion tensor from molecular
dynamics (MD) for a liquid with a liquid− gas or liquid− solid interface. The standard method …

Reactive boundary conditions for stochastic simulations of reaction–diffusion processes

R Erban, SJ Chapman - Physical Biology, 2007 - iopscience.iop.org
Many cellular and subcellular biological processes can be described in terms of diffusing
and chemically reacting species (eg enzymes). Such reaction–diffusion processes can be …

Diffusion effects on rapid bimolecular chemical reactions

J Keizer - Chemical reviews, 1987 - ACS Publications
It has been known for a long time that the rate at which reactants diffuse toward one another
in solution can affect the rate at which they react. The first person to suggest that this might …

Statistical modelling of mass transfer in turbulent two-phase dispersed flows—1. Model development

IV Derevich - International journal of heat and mass transfer, 2000 - Elsevier
A closed equation for probability density function (PDF) of particles coordinates and
velocities in a nonhomogeneous turbulent flow is obtained. On the base of the equation for …

Partially reflected diffusion

A Singer, Z Schuss, A Osipov, D Holcman - SIAM Journal on Applied …, 2008 - SIAM
The radiation (reactive or Robin) boundary condition for the diffusion equation is widely
used in chemical and biological applications to express reactive boundaries. The underlying …

[图书][B] Physics of stochastic processes: how randomness acts in time

R Mahnke, J Kaupuzs, I Lubashevsky - 2009 - books.google.com
Based on lectures given by one of the authors with many years of experience in teaching
stochastic processes, this textbook is unique in combining basic mathematical and physical …

Ion channel based bio-synthetic modulator for diffusive molecular communication

H Arjmandi, A Ahmadzadeh, R Schober… - IEEE transactions on …, 2016 - ieeexplore.ieee.org
In diffusion-based molecular communication (DMC), a transmitter nanomachine is
responsible for signal modulation. Thereby, the transmitter has to be able to control the …

Mean exit times for particles driven by weakly colored noise

PS Hagan, CR Doering, CD Levermore - SIAM Journal on Applied …, 1989 - SIAM
Consider a particle whose velocity is an Ornstein-Uhlenbeck process with correlation time
ε^2, dXdt=σZε,\qquaddZdt=-Zε^2+\sqrt2ξ(t)ε, where ξ(t) is Gaussian white noise. This …

From the solutions of diffusion equation to the solutions of subdiffusive one

T Kosztołowicz - Journal of Physics A: Mathematical and General, 2004 - iopscience.iop.org
Starting with Green's functions found for normal diffusion, we construct exact time-dependent
Green's functions for a subdiffusive equation with fractional time derivatives. Green's …

Diffusion at the liquid− vapor interface of an aqueous ionic solution utilizing a dual simulation technique

CD Wick, LX Dang - The Journal of Physical Chemistry B, 2005 - ACS Publications
The recently proposed dual simulation technique [J. Phys. Chem. B 2004, 108, 6595.], with
slight modification, was used to determine the diffusion coefficients for a variety of regions of …