[HTML][HTML] Developing and reusing bioinformatics data analysis pipelines using scientific workflow systems

M Djaffardjy, G Marchment, C Sebe, R Blanchet… - Computational and …, 2023 - Elsevier
Data analysis pipelines are now established as an effective means for specifying and
executing bioinformatics data analysis and experiments. While scripting languages …

Towards supporting the life cycle of large scale scientific experiments

M Mattoso, C Werner, GH Travassos… - International …, 2010 - inderscienceonline.com
One of the main challenges of scientific experiments is to allow scientists to manage and
exchange their scientific computational resources (data, programs, models, etc.). The …

Cooperative agents-based approach for workflow scheduling on fog-cloud computing

M Mokni, S Yassa, JE Hajlaoui, R Chelouah… - Journal of Ambient …, 2022 - Springer
Connected objects in the Internet of Things (IoT) domain are widespread everywhere. They
interact with each other and cooperate with their neighbors to achieve a common goal. Most …

Ranking BPEL processes for service discovery

D Grigori, JC Corrales, M Bouzeghoub… - IEEE Transactions on …, 2010 - ieeexplore.ieee.org
Finding useful services is a challenging and important task in several applications. Current
approaches for services retrieval are mostly limited to the matching of their inputs/outputs. In …

Search, adapt, and reuse: the future of scientific workflows

S Cohen-Boulakia, U Leser - ACM SIGMOD Record, 2011 - dl.acm.org
Over the last years, a number of scientific workflow management systems (SciWFM) have
been brought to a state of maturity that should permit their usage in a production-style …

myExperiment: defining the social virtual research environment

D De Roure, C Goble, J Bhagat… - 2008 IEEE fourth …, 2008 - ieeexplore.ieee.org
The myExperiment virtual research environment supports the sharing of research objects
used by scientists, such as scientific workflows. For researchers it is both a social …

[HTML][HTML] The collaborative research center fonda

U Leser, M Hilbrich, C Draxl, P Eisert, L Grunske… - 2021 - Springer
Today's scientific data analysis very often requires complex Data Analysis Workflows
(DAWs) executed over distributed computational infrastructures, eg, clusters. Much research …

Effective and efficient similarity search in scientific workflow repositories

J Starlinger, S Cohen-Boulakia, S Khanna… - Future Generation …, 2016 - Elsevier
Scientific workflows have become a valuable tool for large-scale data processing and
analysis. This has led to the creation of specialized online repositories to facilitate workflow …

Experiment line: Software reuse in scientific workflows

E Ogasawara, C Paulino, L Murta, C Werner… - … LA, USA, June 2-4, 2009 …, 2009 - Springer
Over the last years, scientists have been using scientific workflows to build computer
simulations to support the development of new theories. Due to the increasing use of …

[PDF][PDF] Similarity-based workflow clustering

V Silva, F Chirigati, K Maia, E Ogasawara, D Oliveira… - JCIS, 2011 - epacis.net
Scientists have been using scientific workflow management systems (SWfMS) to support
scientific experiments. However, SWfMS expect a modeled workflow to be represented on its …