Scientific workflows: moving across paradigms
Modern scientific collaborations have opened up the opportunity to solve complex problems
that require both multidisciplinary expertise and large-scale computational experiments …
that require both multidisciplinary expertise and large-scale computational experiments …
Workflow-centric research objects: First class citizens in scholarly discourse.
A workflow-centric research object bundles a workflow, the provenance of the results
obtained by its enactment, other digital objects that are relevant for the experiment (papers …
obtained by its enactment, other digital objects that are relevant for the experiment (papers …
HyperFlow: A model of computation, programming approach and enactment engine for complex distributed workflows
B Balis - Future Generation Computer Systems, 2016 - Elsevier
This paper presents HyperFlow: a model of computation, programming approach and
enactment engine for scientific workflows. Workflow programming in HyperFlow combines a …
enactment engine for scientific workflows. Workflow programming in HyperFlow combines a …
BioVeL: a virtual laboratory for data analysis and modelling in biodiversity science and ecology
Background Making forecasts about biodiversity and giving support to policy relies
increasingly on large collections of data held electronically, and on substantial …
increasingly on large collections of data held electronically, and on substantial …
Resource management for bursty streams on multi-tenancy cloud environments
The number of applications that need to process data continuously over long periods of time
has increased significantly over recent years. The emerging Internet of Things and Smart …
has increased significantly over recent years. The emerging Internet of Things and Smart …
Scientific workflows and provenance: Introduction and research opportunities
Scientific workflows are becoming increasingly popular for compute-intensive and data-
intensive scientific applications. The vision and promise of scientific workflows includes …
intensive scientific applications. The vision and promise of scientific workflows includes …
Kurator: A Kepler package for data curation workflows
L Dou, G Cao, PJ Morris, RA Morris… - Procedia Computer …, 2012 - Elsevier
Data curation is critical for scientific data digitization, sharing, integration, and use. This
paper presents Kurator, a software package for automating data curation pipelines in the …
paper presents Kurator, a software package for automating data curation pipelines in the …
Porting adaptive ensemble molecular dynamics workflows to the summit supercomputer
Molecular dynamics (MD) simulations must take very small (femtosecond) integration steps
in simulation-time to avoid numerical errors. Efficient use of parallel programming models …
in simulation-time to avoid numerical errors. Efficient use of parallel programming models …
Increasing scientific workflow programming productivity with hyperflow
B Balis - 2014 9th Workshop on Workflows in Support of Large …, 2014 - ieeexplore.ieee.org
This paper presents HyperFlow: an approach to workflow programming which combines the
advantages of a declarative workflow description and low-level scripting programming. The …
advantages of a declarative workflow description and low-level scripting programming. The …
Towards reliable, performant workflows for streaming-applications on cloud platforms
Scientific workflows are commonplace in eScience applications. Yet, the lack of integrated
support for data models, including streaming data, structured collections and files, is limiting …
support for data models, including streaming data, structured collections and files, is limiting …